RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	GATM	P50440	423 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	ALDH5A1	P51649	535 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	CASP5	P51878	434 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	HOXA4	Q00056	320 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	PRAMEF17	Q5VTA0	474 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	ZNF66	Q6ZN08	573 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	RNF44	Q7L0R7	432 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	CCDC33	Q8N5R6	958 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	SIRT6	Q8N6T7	355 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	TERB1	Q8NA31	727 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	RSPRY1	Q96DX4	576 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	CCDC17	Q96LX7	622 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	MMS19	Q96T76	1030 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	SEC62	Q99442	399 aa	Known RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	CDX2	Q99626	313 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	SELENOO	Q9BVL4	669 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	AMFR	Q9UKV5	643 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	FOCAD	Q5VW36	1801 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	AQP7P3	A6NL99	342 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	KBTBD13	C9JR72	458 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956		F5H6K3	240 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	CTAGE5	O15320	804 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	HMMR	O75330	724 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	SLC25A27	O95847	323 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	FGA	P02671	866 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	RENBP	P51606	427 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	BTK	Q06187	659 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	KLRC3	Q07444	240 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	SRSF4	Q08170	494 aa	Known RBP	5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	FOXF2	Q12947	444 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	TBC1D25	Q3MII6	688 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	SBK1	Q52WX2	424 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	TMEM63B	Q5T3F8	832 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	MANEAL	Q5VSG8	457 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	RASGRP2	Q7LDG7	609 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	CHSY1	Q86X52	802 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	PNLDC1	Q8NA58	520 aa	Known RBP	5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	KLHDC9	Q8NEP7	349 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	SEMA6D	Q8NFY4	1073 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	CTHRC1	Q96CG8	243 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	IQCD	Q96DY2	449 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	DAZAP1	Q96EP5	407 aa	Known RBP	5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	INO80B	Q9C086	356 aa	Predicted RBP	5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	RAVER2	Q9HCJ3	691 aa	Known RBP	5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	TAGLN3	Q9UI15	199 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	VPS51	Q9UID3	782 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	DDX19B	Q9UMR2	479 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	HPSE	Q9Y251	543 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	RLF	Q13129	1914 aa		5.83	□□□□□ -1.48
PSMC6-208	ENST00000554956	ASTN1	O14525	1302 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	SYNRG	Q9UMZ2	1314 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	INMT	O95050	263 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	CLTB	P09497	229 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	DIO1	P49895	249 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	SNAP25	P60880	206 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	SUMO2	P61956	95 aa	Known RBP	5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	CNTN2	Q02246	1040 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	LMAN2	Q12907	356 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	SNRNP48	Q6IEG0	339 aa	Known RBP	5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	PTCHD4	Q6ZW05	846 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	USP49	Q70CQ1	688 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	SRRM1	Q8IYB3	904 aa	Known RBP	5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	FAM186B	Q8IYM0	893 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	CPXCR1	Q8N123	301 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	RNF152	Q8N8N0	203 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	KBTBD3	Q8NAB2	608 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	USP38	Q8NB14	1042 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	ATP11C	Q8NB49	1132 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	LRRC46	Q96FV0	321 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	RITA1	Q96K30	269 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	HIST1H2AA	Q96QV6	131 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	SLF1	Q9BQI6	1058 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	LRRCC1	Q9C099	1032 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.82	□□□□□ -1.48	9e-8	■■□□□ 11.6
PSMC6-208	ENST00000554956	FAM83D	Q9H4H8	585 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	DCTPP1	Q9H773	170 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	PRDM16	Q9HAZ2	1276 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	ECHDC1	Q9NTX5	307 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	ASIC5	Q9NY37	505 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	NYAP2	Q9P242	653 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	DNAJB11	Q9UBS4	358 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	CLIP2	Q9UDT6	1046 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	CAPN11	Q9UMQ6	739 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	CUL9	Q8IWT3	2517 aa		5.82	□□□□□ -1.48
PSMC6-208	ENST00000554956	RASA4B	C9J798	803 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	ATP2A1	O14983	1001 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	RNF113A	O15541	343 aa	Known RBP	5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	GPAA1	O43292	621 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	RASA4	O43374	803 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	THAP12	O43422	761 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	NMT2	O60551	498 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	AKR1A1	P14550	325 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	CREB1	P16220	341 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	MCM5	P33992	734 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	STT3A	P46977	705 aa		5.81	□□□□□ -1.48
PSMC6-208	ENST00000554956	CDK7	P50613	346 aa		5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms