RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 ARRDC3Q96B67 414 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 CCNL2Q96S94 520 aaPredicted RBP13.61□□□□□ -0.23
TUBB3-207ENST00000554927 DUSP23Q9BVJ7 150 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 INTS2Q9H0H0 1204 aaKnown RBP13.61□□□□□ -0.23
TUBB3-207ENST00000554927 CAAP1Q9H8G2 361 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 UBE2TQ9NPD8 197 aaPredicted RBP13.61□□□□□ -0.23
TUBB3-207ENST00000554927 FZD3Q9NPG1 666 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 ST7Q9NRC1 585 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 DNAJC28Q9NX36 388 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 KIAA1468Q9P260 1216 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 SARDHQ9UL12 918 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
TUBB3-207ENST00000554927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 LY6G6EA0A0G2JKS1 128 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 A0A1W2PNU3 283 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 A0A1W2PQU0 124 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 K7ESM1 405 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 TERTO14746 1132 aaKnown RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 SCAMP1O15126 338 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 NEBLO76041 1014 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 TNFSF15O95150 251 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 LTFP02788 710 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 GIMD1P0DJR0 217 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 ZNF177Q13360 481 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 ARL13BQ3SXY8 428 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 AGBL4Q5VU57 503 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 CRTC1Q6UUV9 634 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 ZNF574Q6ZN55 896 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 USP53Q70EK8 1073 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 EFL1Q7Z2Z2 1120 aaKnown RBP13.6□□□□□ -0.23
TUBB3-207ENST00000554927 CHSY1Q86X52 802 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 TMEM145Q8NBT3 493 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 KAT5Q92993 513 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 GRAMD1AQ96CP6 724 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 MIS12Q9H081 205 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 SYNDIG1Q9H7V2 258 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 TJP2Q9UDY2 1190 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 PCDHGA8Q9Y5G5 932 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 U3KQA8 63 aa13.6□□□□□ -0.23
TUBB3-207ENST00000554927 PMS2P1A4D2B8 440 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 RNF225M0QZC1 329 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-207ENST00000554927 GJB6O95452 261 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 PDGFRAP16234 1089 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 CLDN2P57739 230 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 HNRNPKP61978 463 aaKnown RBP eCLIP13.59□□□□□ -0.23
TUBB3-207ENST00000554927 SKOR1P84550 965 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 RAP1GAP2Q684P5 730 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 GUSBP11Q6P575 273 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 PTAR1Q7Z6K3 402 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-207ENST00000554927 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 EXTL1Q92935 676 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 FAM131CQ96AQ9 280 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 FAM149B1Q96BN6 582 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-207ENST00000554927 SERPINB11Q96P15 392 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 ENTPD2Q9Y5L3 495 aa13.59□□□□□ -0.23
TUBB3-207ENST00000554927 CDRT15L2A8MXV6 281 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 APOEP02649 317 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 HNRNPA2B1P22626 353 aaKnown RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 USP8P40818 1118 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 SNX16P57768 344 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 LINC00303Q3SY05 128 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 GBP6Q6ZN66 633 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 Q6ZSR6 202 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 WDR36Q8NI36 951 aaKnown RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 DQX1Q8TE96 717 aaKnown RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 CLEC4CQ8WTT0 213 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 STK32AQ8WU08 396 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 FRS2Q8WU20 508 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 RNF34Q969K3 372 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 PRR11Q96HE9 360 aaPredicted RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 NOX5Q96PH1 765 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 MED15Q96RN5 788 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 NCKIPSDQ9NZQ3 722 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 SLC25A13Q9UJS0 675 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 ATXN7L1Q9ULK2 861 aaPredicted RBP13.58□□□□□ -0.24
TUBB3-207ENST00000554927 PPM1HQ9ULR3 514 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 TLR6Q9Y2C9 796 aa13.58□□□□□ -0.24
TUBB3-207ENST00000554927 H3BM21 787 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 MUSKO15146 869 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 THAP12O43422 761 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 PCDH8O95206 1070 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 FAM87AP0C7U9 286 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 TACR2P21452 398 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
TUBB3-207ENST00000554927 TAS2R38P59533 333 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 CCDC15Q0P6D6 951 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 MEA1Q16626 185 aa13.57□□□□□ -0.24
TUBB3-207ENST00000554927 ZNF284Q2VY69 593 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms