RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TMPRSS6Q8IU80 811 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 BBS7Q8IWZ6 715 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ADGRF2Q8IZF7 708 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 NUP93Q8N1F7 819 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 LINC01356Q8N9X3 169 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 OVCA2Q8WZ82 227 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 PRCCQ92733 491 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 IGSF8Q969P0 613 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 MYLPFQ96A32 169 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ERLEC1Q96DZ1 483 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 SIPA1Q96FS4 1042 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CDK5RAP3Q96JB5 506 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 C8orf76Q96K31 380 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 SYT15Q9BQS2 421 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 NOL6Q9H6R4 1146 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CD93Q9NPY3 652 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 DNAJC17Q9NVM6 304 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 USP36Q9P275 1121 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 FTSJ1Q9UET6 329 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CHORDC1Q9UHD1 332 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 EIF2B4Q9UI10 523 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ITGA11Q9UKX5 1188 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ANKRD6Q9Y2G4 727 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 STON1Q9Y6Q2 735 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 LOC400499M0QZD8 3231 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 LAMA1P25391 3075 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 THADAQ6YHU6 1953 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 KCNJ18B7U540 433 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 F8VP50 259 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 KCNK3O14649 394 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 COCHO43405 550 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 SLC26A4O43511 780 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 HCRTO43612 131 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 CACNG3O60359 315 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 SYNCRIPO60506 623 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 LDHAP00338 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 KRT18P05783 430 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 KRT19P08727 400 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PDGFRBP09619 1106 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 CISD3P0C7P0 127 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 ACADMP11310 421 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 C6P13671 934 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 TYRP14679 529 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 WARSP23381 471 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 ADSSP30520 456 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 GNL1P36915 607 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 IL12RB1P42701 662 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 NOP2P46087 812 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 TUBP50607 506 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 CCT8P50990 548 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 UCNP55089 124 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PSMC1P62191 440 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 TLE3Q04726 772 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 SRSF1Q07955 248 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 CCDC142Q17RM4 750 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 SKOR2Q2VWA4 1001 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 FUT11Q495W5 492 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PAQR3Q6TCH7 311 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 CCDC81Q6ZN84 652 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 JAMLQ86YT9 394 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 CXorf38Q8TB03 319 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 UCMAQ8WVF2 138 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 POMGNT1Q8WZA1 660 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 RNF34Q969K3 372 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PCED1BQ96HM7 432 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 HPDLQ96IR7 371 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PLIN2Q99541 437 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 HNRNPABQ99729 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 REEP2Q9BRK0 252 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 BBS2Q9BXC9 721 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 NACA2Q9H009 215 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 ST6GALNAC4Q9H4F1 302 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 ZHX3Q9H4I2 956 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 IGSF5Q9NSI5 407 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 COMMD8Q9NX08 183 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 THAP10Q9P2Z0 257 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-229ENST00000554672 FBLN5Q9UBX5 448 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 FBXO10Q9UK96 956 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 NBEAQ8NFP9 2946 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 ATG2BQ96BY7 2078 aa5.08□□□□□ -1.6
ATXN3-229ENST00000554672 PDCD11Q14690 1871 aaKnown RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 A0A1B0GTQ1 180 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TISP43B9A030 160 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 NEDD8-MDP1E9PL57 170 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TIMM44O43615 452 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 SLC28A2O43868 658 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 TSPAN3O60637 253 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 RFPL3O75679 317 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-229ENST00000554672 RECKO95980 971 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 NTRK1P04629 796 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 CYBBP04839 570 aa5.07□□□□□ -1.6
ATXN3-229ENST00000554672 ITGAVP06756 1048 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms