RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 STAT6P42226 847 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 AARSP49588 968 aaKnown RBP eCLIP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 GUCY2FP51841 1108 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CASP5P51878 434 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SPAG1Q07617 926 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SIGLEC14Q08ET2 396 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 PDCD1Q15116 288 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 STK38Q15208 465 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 KYAT1Q16773 422 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ZC2HC1CQ53FD0 456 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CT47A1Q5JQC4 288 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 C1QL3Q5VWW1 255 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SLC8B1Q6J4K2 584 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 PDXDC1Q6P996 788 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SHC4Q6S5L8 630 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CCDC73Q6ZRK6 1079 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SPATA31D4Q6ZUB0 917 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF720Q7Z2F6 126 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 GLB1L2Q8IW92 636 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CMIPQ8IY22 773 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 MDGA1Q8NFP4 955 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 PPP1R14CQ8TAE6 165 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SMG7Q92540 1137 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 HVCN1Q96D96 273 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 BICD1Q96G01 975 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF396Q96N95 335 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 MYADMQ96S97 322 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 TCHPQ9BT92 498 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 TRIM8Q9BZR9 551 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ZHX3Q9H4I2 956 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 PLEKHA4Q9H4M7 779 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF703Q9H7S9 590 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 IFT22Q9H7X7 185 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 PLEKHA5Q9HAU0 1116 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 OLFML3Q9NRN5 406 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 EPS15L1Q9UBC2 864 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 CPSF3Q9UKF6 684 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 TMPRSS11EQ9UL52 423 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 UBQLN1Q9UMX0 589 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 SORCS3Q9UPU3 1222 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 TMA7Q9Y2S6 64 aaKnown RBP4.48□□□□□ -1.69
VTI1B-203ENST00000554636 STYXL1Q9Y6J8 313 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 NUMBLQ9Y6R0 609 aa4.48□□□□□ -1.69
VTI1B-203ENST00000554636 ARHGEF37A1IGU5 675 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 WDR27A2RRH5 827 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 GOLGA6L6A8MZA4 724 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 M0QZQ0 153 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CCL16O15467 120 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 HOXA3O43365 443 aaPredicted RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 GCNT3O95395 438 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 VNN2O95498 520 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 PDGFBP01127 241 aaPredicted RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 HNRNPA1P09651 372 aaKnown RBP eCLIP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CYP3A5P20815 502 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 ADSSP30520 456 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 RPL9P32969 192 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 ABCD1P33897 745 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 OR1D2P34982 312 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 PLA2G5P39877 138 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 MATR3P43243 847 aaKnown RBP eCLIP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 GPR15P49685 360 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 PTTG1IPP53801 180 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 VCPP55072 806 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 NTHL1P78549 312 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CDK17Q00537 523 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 ROR1Q01973 937 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 ALCAMQ13740 583 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 DHCR24Q15392 516 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 UGT8Q16880 541 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 L1TD1Q5T7N2 865 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 SPATA1Q5VX52 437 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 C9orf57Q5W0N0 161 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 JADE1Q6IE81 842 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 SDE2Q6IQ49 451 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CRELD2Q6UXH1 353 aaPredicted RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 GET4Q7L5D6 327 aaPredicted RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 RASSF3Q86WH2 238 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 LYSMD2Q8IV50 215 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 BRSK2Q8IWQ3 736 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CD302Q8IX05 232 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 EFCAB13Q8IY85 973 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 PDILTQ8N807 584 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 OR14C36Q8NHC7 312 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CPT1CQ8TCG5 803 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 KCNG4Q8TDN1 519 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 DHX58Q96C10 678 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CBWD1Q9BRT8 395 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 MSTO1Q9BUK6 570 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 CPEB1Q9BZB8 566 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 TRIM9Q9C026 710 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 QRSL1Q9H0R6 528 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 TNMDQ9H2S6 317 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 MRPL44Q9H9J2 332 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 RPF1Q9H9Y2 349 aaKnown RBP4.47□□□□□ -1.69
VTI1B-203ENST00000554636 TBC1D7Q9P0N9 293 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 SEL1LQ9UBV2 794 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 DPP7Q9UHL4 492 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 FBXL5Q9UKA1 691 aa4.47□□□□□ -1.69
VTI1B-203ENST00000554636 DUSP12Q9UNI6 340 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms