RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CDY2AQ9Y6F7 541 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 CDY1Q9Y6F8 540 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 POMCP01189 267 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ITGAXP20702 1163 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 MPP1Q00013 466 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 DSG1Q02413 1049 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 TBL3Q12788 808 aaKnown RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ASPHQ12797 758 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 PPM1LQ5SGD2 360 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 SCAMP5Q8TAC9 235 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ACE2Q9BYF1 805 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 NUF2Q9BZD4 464 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 FAM105AQ9NUU6 356 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ADAM28Q9UKQ2 775 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 RUVBL2Q9Y230 463 aaKnown RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 MOCS2O96007 188 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ATP5BP06576 529 aaKnown RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZNF865P0CJ78 1059 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 COX4I1P13073 169 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 BRCC3P46736 316 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 ATXN3P54252 364 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 CMPK2Q5EBM0 449 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 CNTD1Q8N815 330 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 SREK1Q8WXA9 508 aaKnown RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 HDAC11Q96DB2 347 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 TEKT5Q96M29 485 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 TSNARE1Q96NA8 513 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 TMEM209Q96SK2 561 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 SLC9A7Q96T83 725 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 OMDQ99983 421 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 FTHL17Q9BXU8 183 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 VCXQ9H320 206 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 STN1Q9H668 368 aaKnown RBP15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 S100A14Q9HCY8 104 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 FIS1Q9Y3D6 152 aa15.96■□□□□ 0.15
ARHGEF40-203ENST00000554514 NCAM2O15394 837 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 MSI1O43347 362 aaKnown RBP15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 VAPBO95292 243 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 MPOP05164 745 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 MSX2P35548 267 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 GRIA4P48058 902 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 LHX1P48742 406 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 CPT1AP50416 773 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 NAGLUP54802 743 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 GALNT2Q10471 571 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 PRPSAP1Q14558 356 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 TIGD5Q53EQ6 642 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 PNPLA1Q8N8W4 532 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 PHC3Q8NDX5 983 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 LENG8Q96PV6 779 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 IL22Q9GZX6 179 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 PRDM16Q9HAZ2 1276 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 TCF7L2Q9NQB0 619 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 INPP5FQ9Y2H2 1132 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 MYADML2A6NDP7 307 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 ARL5CA6NH57 179 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 TIMM44O43615 452 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SMIM24O75264 130 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 PMPCBO75439 489 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 CDK7P50613 346 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SCAPQ12770 1279 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 CDH17Q12864 832 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 KLF10Q13118 480 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 CCNIQ14094 377 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SEPT6Q14141 434 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 EPGNQ6UW88 154 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 CCNYL1Q8N7R7 359 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SMARCD1Q96GM5 515 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 ECSITQ9BQ95 431 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 M0QZ92 97 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 B3GAT3O94766 335 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 PIGNO95427 931 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 MAGEA12P43365 314 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 NUDT2P50583 147 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 CDC16Q13042 620 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMEM198Q66K66 360 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 NAIF1Q69YI7 327 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 FICDQ9BVA6 458 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SLC2A6Q9UGQ3 507 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 TRHDEQ9UKU6 1024 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 SSX2IPQ9Y2D8 614 aa15.95■□□□□ 0.14
ARHGEF40-203ENST00000554514 HHLA1C9JL84 531 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 NPY2RP49146 381 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 MAP2K5Q13163 448 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 PDCD2Q16342 344 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 PCSK7Q16549 785 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 FSCN1Q16658 493 aaKnown RBP15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ANO4Q32M45 955 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 NAPEPLDQ6IQ20 393 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 BHLHA9Q7RTU4 235 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 CLEC14AQ86T13 490 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 DQX1Q8TE96 717 aaKnown RBP15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ILKAPQ9H0C8 392 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMLHEQ9NVH6 421 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 CFLARO15519 480 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 AHSGP02765 367 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ARL13AQ5H913 290 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 FSCBQ5H9T9 825 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ESRP1Q6NXG1 681 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms