RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 STKLD1Q8NE28 680 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 IL17REQ8NFR9 667 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 OR10H5Q8NGA6 315 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 RAET1EQ8TD07 263 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 OTUD7AQ8TE49 926 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 NSMCE1Q8WV22 266 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 SSH1Q8WYL5 1049 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 HERVK_113Q902F9 699 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 NCSTNQ92542 709 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 KIFAP3Q92845 792 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 ARL5BQ96KC2 179 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 CEP19Q96LK0 163 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 TTC1Q99614 292 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 TSG101Q99816 390 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 C1QTNF1Q9BXJ1 281 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 NAA15Q9BXJ9 866 aaKnown RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 KLHL4Q9C0H6 718 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 NDEL1Q9GZM8 345 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 GLT8D2Q9H1C3 349 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 SLC40A1Q9NP59 571 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 PIH1D3Q9NQM4 214 aaKnown RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 CCDC177Q9NQR7 707 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 C8orf4Q9NR00 106 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 MRGBPQ9NV56 204 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 RMND1Q9NWS8 449 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 SLC39A1Q9NY26 324 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 EURLQ9NYK6 297 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 POLLQ9UGP5 575 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 HMGXB4Q9UGU5 601 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 ZNF180Q9UJW8 692 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 DUSP12Q9UNI6 340 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 FAM32AQ9Y421 112 aaKnown RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 SNX9Q9Y5X1 595 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.6□□□□□ -1.67
ATXN3-227ENST00000554491 MYO3BQ8WXR4 1341 aa4.6□□□□□ -1.67
ATXN3-227ENST00000554491 CYP2D7A0A087X1C5 515 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 GAGE12BA1L429 117 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 MACROD2A1Z1Q3 448 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 ZNF804BA4D1E1 1349 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 GAGE12HA6NDE8 117 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 SRRM3A6NNA2 597 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 RTCAO00442 366 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TLR2O60603 784 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 RFPL3O75679 317 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 INMTO95050 263 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 EPN2O95208 641 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 FKBP9O95302 570 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 SLC4A1P02730 911 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 GSTT2P0CG29 244 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 GSTT2BP0CG30 244 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 NAGAP17050 411 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CFL1P23528 166 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TKTP29401 623 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 HNF1BP35680 557 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 NEK4P51957 841 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 SEC24CP53992 1094 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 GRSF1Q12849 480 aaKnown RBP eCLIP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 SQLEQ14534 574 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 PUM3Q15397 648 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TTC39AQ5SRH9 613 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CYP4A22Q5TCH4 519 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TATDN1Q6P1N9 297 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 KLC3Q6P597 504 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CYB5D1Q6P9G0 228 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 SYCE2Q6PIF2 218 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 LMBR1LQ6UX01 489 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 NECAB2Q7Z6G3 386 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 NLRP14Q86W24 1093 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CHD1LQ86WJ1 897 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 LYSMD2Q8IV50 215 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 NKAIN4Q8IVV8 208 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 HACE1Q8IYU2 909 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 FAM9CQ8IZT9 166 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CPXCR1Q8N123 301 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 RNF169Q8NCN4 708 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CPEB3Q8NE35 698 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TBC1D16Q8TBP0 767 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 DLG5Q8TDM6 1919 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 BRI3BPQ8WY22 251 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 P3H4Q92791 437 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 FAM149B1Q96BN6 582 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 EFHD2Q96C19 240 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 ANKRD36BP1Q96IX9 119 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 SECISBP2Q96T21 854 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 UHRF1Q96T88 793 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CIB1Q99828 191 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CCDC28BQ9BUN5 200 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 STMN4Q9H169 189 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 VCXQ9H320 206 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 PRDM12Q9H4Q4 367 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 ACAD9Q9H845 621 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 VPS37BQ9H9H4 285 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 FARSBQ9NSD9 589 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 EHD2Q9NZN4 543 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 USP36Q9P275 1121 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 PDP2Q9P2J9 529 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 CTNNAL1Q9UBT7 734 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms