RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ESYT3A0FGR9 886 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 J3KR12 359 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 DYNC1I1O14576 645 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 HOXC11O43248 304 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 MBTPS2O43462 519 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 FCARP24071 287 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PTPN3P26045 913 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 TNFRSF8P28908 595 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 CSKP41240 450 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 TNNT3P45378 269 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 MMP13P45452 471 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 RPL21P46778 160 aaKnown RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PLTPP55058 493 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 SULT2A1Q06520 285 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ITKQ08881 620 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 FCHO2Q0JRZ9 810 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 WASHC5Q12768 1159 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ZNF235Q14590 738 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 LBRQ14739 615 aaKnown RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PARM1Q6UWI2 310 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PPP1R21Q6ZMI0 780 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ARHGAP36Q6ZRI8 547 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PPIL6Q8IXY8 311 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ZNF567Q8N184 647 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 DCAF4L2Q8NA75 395 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 CSGALNACT1Q8TDX6 532 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 CASKIN2Q8WXE0 1202 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 SEC14L1Q92503 715 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 MAML1Q92585 1016 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 EXOC4Q96A65 974 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 RSPRY1Q96DX4 576 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 TEKT5Q96M29 485 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 AGAP3Q96P47 875 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 LRRC3BQ96PB8 259 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PNKPQ96T60 521 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 IL12RB2Q99665 862 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 KXD1Q9BQD3 176 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 FAM83CQ9BQN1 747 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 CINPQ9BW66 212 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 PHF7Q9BWX1 381 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ACE2Q9BYF1 805 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 FRMD8Q9BZ67 464 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 FOXP3Q9BZS1 431 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 EBF3Q9H4W6 596 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 BRD9Q9H8M2 597 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ECT2Q9H8V3 914 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 SEPT3Q9UH03 358 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 RSPH14Q9UHP6 348 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 SLC8A2Q9UPR5 921 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 AAR2Q9Y312 384 aaKnown RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 TTLL3Q9Y4R7 772 aa10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 ANAPC1Q9H1A4 1944 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CHD7Q9P2D1 2997 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CXorf51AA0A1B0GTR3 108 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CCDC151A5D8V7 595 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 ZBTB24O43167 697 aaPredicted RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 ANXA9O76027 345 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CYP17A1P05093 508 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 PABPC1P11940 636 aaKnown RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 POLR2EP19388 210 aaKnown RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CES1P23141 567 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 MZF1P28698 734 aaPredicted RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 GDI1P31150 447 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 HSPA9P38646 679 aaKnown RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 NNMTP40261 264 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CARSP49589 748 aaKnown RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 DGKGP49619 791 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 PLK1P53350 603 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 ITGA8P53708 1063 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 VSNL1P62760 191 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CDK16Q00536 496 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 LMAN2Q12907 356 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 RUNX3Q13761 415 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 GRM2Q14416 872 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 MORF4L2Q15014 288 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 E2F5Q15329 346 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 INO80DQ53TQ3 878 aaPredicted RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 FSCBQ5H9T9 825 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 RNF43Q68DV7 783 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 TRIM68Q6AZZ1 485 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 PRUNE1Q86TP1 453 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 AHI1Q8N157 1196 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 TAB3Q8N5C8 712 aaPredicted RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 NAT16Q8N8M0 369 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 GLIS1Q8NBF1 620 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 WFIKKN2Q8TEU8 576 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 ART4Q93070 314 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 ZFYVE19Q96K21 471 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 FMO2Q99518 471 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 CEP41Q9BYV8 373 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 ABCB8Q9NUT2 735 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 DNAJC17Q9NVM6 304 aaKnown RBP10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 IGSF9Q9P2J2 1179 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 DEC1Q9P2X7 70 aa10.66□□□□□ -0.7
TMEM55B-205ENST00000554028 SLC25A13Q9UJS0 675 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms