RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 SLC44A3Q8N4M1 653 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 TERB1Q8NA31 727 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 WFDC5Q8TCV5 224 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 SPATA13Q96N96 652 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 FAM129AQ9BZQ8 928 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 PDFQ9HBH1 243 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 GOLGA6AQ9NYA3 693 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 KLHL8Q9P2G9 620 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 SEPT3Q9UH03 358 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 ASIC3Q9UHC3 531 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 VPS51Q9UID3 782 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 NPC1O15118 1278 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 APODP05090 189 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 MCM3P25205 808 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 CD70P32970 193 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 ACVRL1P37023 503 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 LBRQ14739 615 aaKnown RBP14.79□□□□□ -0.04
SHMT2-210ENST00000553950 FUT11Q495W5 492 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 TEX35Q5T0J7 233 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 MARC1Q5VT66 337 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 FAM71DQ8N9W8 422 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 KDM1BQ8NB78 822 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 BBOF1Q8ND07 529 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 UBXN4Q92575 508 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 ALG14Q96F25 216 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 LMLNQ96KR4 655 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 PNKPQ96T60 521 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 CINPQ9BW66 212 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-210ENST00000553950 GTSE1Q9NYZ3 720 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 SEPT10Q9P0V9 454 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 DUSP12Q9UNI6 340 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 SORCS3Q9UPU3 1222 aa14.79□□□□□ -0.04
SHMT2-210ENST00000553950 TARSL2A2RTX5 802 aaKnown RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 SMAPO00193 183 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 TTI1O43156 1089 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 RAD51CO43502 376 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 GCATO75600 419 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 KRT14P02533 472 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 TUBBP07437 444 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 SRPRAP08240 638 aaKnown RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 CES1P23141 567 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 PTPN3P26045 913 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 MZF1P28698 734 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 CTHP32929 405 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 FDFT1P37268 417 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 GRIA2P42262 883 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 MMP13P45452 471 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 MAPK8P45983 427 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 KCNJ1P48048 391 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 SERPINH1P50454 418 aaKnown RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 ST8SIA6P61647 398 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 GAB4Q2WGN9 574 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 TEX44Q53QW1 395 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 RALGPS1Q5JS13 557 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 MBLAC2Q68D91 279 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 PCGF5Q86SE9 256 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 TEX26Q8N6G2 289 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 NAT16Q8N8M0 369 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 NOA1Q8NC60 698 aaKnown RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 OR52K2Q8NGK3 314 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 TTC17Q96AE7 1141 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 IL12RB2Q99665 862 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 RPP25Q9BUL9 199 aaKnown RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 CEP44Q9C0F1 390 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 POLR1EQ9GZS1 481 aaKnown RBP14.78□□□□□ -0.04
SHMT2-210ENST00000553950 USP29Q9HBJ7 922 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 HS3ST2Q9Y278 367 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 ANKRD36A6QL64 1941 aa14.78□□□□□ -0.04
SHMT2-210ENST00000553950 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-210ENST00000553950 SPECC1L-ADORA2AF8WAN1 911 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 KCNK1O00180 336 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 HEXIM1O94992 359 aaKnown RBP14.77□□□□□ -0.05
SHMT2-210ENST00000553950 CISD3P0C7P0 127 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 OPRD1P41143 372 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 PTGIRP43119 386 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 ARF5P84085 180 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 ECT2LQ008S8 904 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 KDSRQ06136 332 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 CALCOCO2Q13137 446 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 PRPSAP1Q14558 356 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 SLC14A2Q15849 920 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 ARHGAP36Q6ZRI8 547 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 C12orf40Q86WS4 652 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 TP53INP2Q8IXH6 220 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 CCDC33Q8N5R6 958 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 ISG20Q96AZ6 181 aaKnown RBP14.77□□□□□ -0.05
SHMT2-210ENST00000553950 PSKH2Q96QS6 385 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 P2RY13Q9BPV8 354 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 CIPCQ9C0C6 399 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 GBA3Q9H227 469 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 RSPH14Q9UHP6 348 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 CLEC4EQ9ULY5 219 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 PIAS3Q9Y6X2 628 aa14.77□□□□□ -0.05
SHMT2-210ENST00000553950 OTOL1A6NHN0 477 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ERI2A8K979 691 aaKnown RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 J3KR12 359 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 MAN2B1O00754 1011 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ZMPSTE24O75844 475 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ANXA9O76027 345 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 TMCC1O94876 653 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms