RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RRAGBQ5VZM2 374 aa2.56□□□□□ -2
SRP54-204ENST00000553923 CCDC144NLQ6NUI1 221 aa2.56□□□□□ -2
SRP54-204ENST00000553923 CFAP161Q6P656 301 aa2.56□□□□□ -2
SRP54-204ENST00000553923 TLDC1Q6P9B6 456 aa2.56□□□□□ -2
SRP54-204ENST00000553923 C16orf89Q6UX73 402 aa2.56□□□□□ -2
SRP54-204ENST00000553923 Q6ZSV7 163 aa2.56□□□□□ -2
SRP54-204ENST00000553923 ZNF771Q7L3S4 317 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 KRT28Q7Z3Y7 464 aa2.56□□□□□ -2
SRP54-204ENST00000553923 SYTL1Q8IYJ3 562 aa2.56□□□□□ -2
SRP54-204ENST00000553923 NAXEQ8NCW5 288 aa2.56□□□□□ -2
SRP54-204ENST00000553923 ABHD5Q8WTS1 349 aa2.56□□□□□ -2
SRP54-204ENST00000553923 TBC1D20Q96BZ9 403 aa2.56□□□□□ -2
SRP54-204ENST00000553923 ZSCAN31Q96LW9 406 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 NAP1L5Q96NT1 182 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 DUX5Q96PT3 197 aa2.56□□□□□ -2
SRP54-204ENST00000553923 SEC62Q99442 399 aaKnown RBP2.56□□□□□ -2
SRP54-204ENST00000553923 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.56□□□□□ -24e-9■□□□□ 9.3
SRP54-204ENST00000553923 RETREG1Q9H6L5 497 aa2.56□□□□□ -2
SRP54-204ENST00000553923 CLIC5Q9NZA1 410 aa2.56□□□□□ -2
SRP54-204ENST00000553923 IFT80Q9P2H3 777 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 NOL7Q9UMY1 257 aaKnown RBP2.56□□□□□ -2
SRP54-204ENST00000553923 CRYL1Q9Y2S2 319 aa2.56□□□□□ -2
SRP54-204ENST00000553923 GPR52Q9Y2T5 361 aa2.56□□□□□ -2
SRP54-204ENST00000553923 F8W8V4 182 aa2.55□□□□□ -2
SRP54-204ENST00000553923 THAP12O43422 761 aa2.55□□□□□ -2
SRP54-204ENST00000553923 CCNT2O60583 730 aaKnown RBP2.55□□□□□ -2
SRP54-204ENST00000553923 COQ9O75208 318 aa2.55□□□□□ -2
SRP54-204ENST00000553923 CNTN5O94779 1100 aa2.55□□□□□ -2
SRP54-204ENST00000553923 CSTBP04080 98 aaKnown RBP2.55□□□□□ -2
SRP54-204ENST00000553923 SERPINB2P05120 415 aa2.55□□□□□ -2
SRP54-204ENST00000553923 HARSP12081 509 aaKnown RBP2.55□□□□□ -2
SRP54-204ENST00000553923 TGM2P21980 687 aa2.55□□□□□ -2
SRP54-204ENST00000553923 KRT9P35527 623 aa2.55□□□□□ -2
SRP54-204ENST00000553923 PMS2P11Q13670 270 aa2.55□□□□□ -2
SRP54-204ENST00000553923 PRKG1Q13976 671 aa2.55□□□□□ -2
SRP54-204ENST00000553923 TIGD6Q17RP2 521 aa2.55□□□□□ -2
SRP54-204ENST00000553923 ITPRIPL1Q6GPH6 555 aa2.55□□□□□ -2
SRP54-204ENST00000553923 ADAM5Q6NVV9 412 aa2.55□□□□□ -2
SRP54-204ENST00000553923 PGBD2Q6P3X8 592 aa2.55□□□□□ -2
SRP54-204ENST00000553923 PIK3AP1Q6ZUJ8 805 aa2.55□□□□□ -2
SRP54-204ENST00000553923 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SRP54-204ENST00000553923 ZNF367Q7RTV3 350 aa2.55□□□□□ -2
SRP54-204ENST00000553923 CREBRFQ8IUR6 639 aa2.55□□□□□ -2
SRP54-204ENST00000553923 CNPY4Q8N129 248 aa2.55□□□□□ -2
SRP54-204ENST00000553923 TXLNBQ8N3L3 684 aa2.55□□□□□ -2
SRP54-204ENST00000553923 ATG16L2Q8NAA4 619 aa2.55□□□□□ -2
SRP54-204ENST00000553923 RUBCNQ92622 972 aa2.55□□□□□ -2
SRP54-204ENST00000553923 MUL1Q969V5 352 aa2.55□□□□□ -2
SRP54-204ENST00000553923 IQCDQ96DY2 449 aa2.55□□□□□ -2
SRP54-204ENST00000553923 UBXN10Q96LJ8 280 aa2.55□□□□□ -2
SRP54-204ENST00000553923 PPM1MQ96MI6 270 aa2.55□□□□□ -2
SRP54-204ENST00000553923 BARD1Q99728 777 aaKnown RBP2.55□□□□□ -2
SRP54-204ENST00000553923 ISCA1Q9BUE6 129 aa2.55□□□□□ -2
SRP54-204ENST00000553923 UNKQ9C0B0 810 aaKnown RBP2.55□□□□□ -2
SRP54-204ENST00000553923 ZBTB26Q9HCK0 441 aa2.55□□□□□ -2
SRP54-204ENST00000553923 TXNRD2Q9NNW7 524 aa2.55□□□□□ -2
SRP54-204ENST00000553923 PNPLA8Q9NP80 782 aa2.55□□□□□ -2
SRP54-204ENST00000553923 ITM2CQ9NQX7 267 aa2.55□□□□□ -2
SRP54-204ENST00000553923 IRAK4Q9NWZ3 460 aa2.55□□□□□ -2
SRP54-204ENST00000553923 TMOD4Q9NZQ9 345 aa2.55□□□□□ -2
SRP54-204ENST00000553923 IGSF9Q9P2J2 1179 aa2.55□□□□□ -2
SRP54-204ENST00000553923 GRHPRQ9UBQ7 328 aa2.55□□□□□ -2
SRP54-204ENST00000553923 OR2W5A6NFC9 320 aa2.54□□□□□ -2
SRP54-204ENST00000553923 TSPY2A6NKD2 308 aa2.54□□□□□ -2
SRP54-204ENST00000553923 APOL1O14791 398 aa2.54□□□□□ -2
SRP54-204ENST00000553923 FFAR2O15552 330 aa2.54□□□□□ -2
SRP54-204ENST00000553923 IRAK2O43187 625 aa2.54□□□□□ -2
SRP54-204ENST00000553923 BUB3O43684 328 aa2.54□□□□□ -2
SRP54-204ENST00000553923 GFPT2O94808 682 aa2.54□□□□□ -2
SRP54-204ENST00000553923 LDLRP01130 860 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CD4P01730 458 aa2.54□□□□□ -2
SRP54-204ENST00000553923 DHRS4L1P0CG22 281 aa2.54□□□□□ -2
SRP54-204ENST00000553923 TSPY3P0CV98 308 aa2.54□□□□□ -2
SRP54-204ENST00000553923 TSPY8P0CW00 308 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CHRNB2P17787 502 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CASP5P51878 434 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CRIP2P52943 208 aaPredicted RBP2.54□□□□□ -2
SRP54-204ENST00000553923 SLC37A1P57057 533 aa2.54□□□□□ -2
SRP54-204ENST00000553923 TSPY1Q01534 308 aa2.54□□□□□ -2
SRP54-204ENST00000553923 ZNF543Q08ER8 600 aa2.54□□□□□ -2
SRP54-204ENST00000553923 DAG1Q14118 895 aa2.54□□□□□ -2
SRP54-204ENST00000553923 POSTNQ15063 836 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CCDC96Q2M329 555 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CCDC184Q52MB2 194 aa2.54□□□□□ -2
SRP54-204ENST00000553923 SPECC1Q5M775 1068 aa2.54□□□□□ -2
SRP54-204ENST00000553923 FAXCQ5TGI0 409 aa2.54□□□□□ -2
SRP54-204ENST00000553923 KLHDC7AQ5VTJ3 777 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CCDC30Q5VVM6 783 aa2.54□□□□□ -2
SRP54-204ENST00000553923 ARMC3Q5W041 872 aa2.54□□□□□ -2
SRP54-204ENST00000553923 HIBCHQ6NVY1 386 aaPredicted RBP2.54□□□□□ -2
SRP54-204ENST00000553923 MZT2BQ6NZ67 158 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CRTC1Q6UUV9 634 aa2.54□□□□□ -2
SRP54-204ENST00000553923 C4orf50Q6ZRC1 276 aa2.54□□□□□ -2
SRP54-204ENST00000553923 C1orf122Q6ZSJ8 110 aa2.54□□□□□ -2
SRP54-204ENST00000553923 CYB5R4Q7L1T6 521 aa2.54□□□□□ -2
SRP54-204ENST00000553923 SMIM29Q86T20 159 aa2.54□□□□□ -2
SRP54-204ENST00000553923 HEATR4Q86WZ0 1026 aa2.54□□□□□ -2
SRP54-204ENST00000553923 OR8H2Q8N162 312 aa2.54□□□□□ -2
SRP54-204ENST00000553923 NEXN-AS1Q8NBZ9 246 aa2.54□□□□□ -2
SRP54-204ENST00000553923 UCMAQ8WVF2 138 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms