RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 OR1E1P30953 314 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 L1CAMP32004 1257 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 PTGER3P43115 390 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 TPMTP51580 245 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 ARF5P84085 180 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 EFHC2Q5JST6 749 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 ERMARDQ5T6L9 678 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 RWDD4Q6NW29 188 aaKnown RBP8.4□□□□□ -1.06
RDH11-205ENST00000553816 ARMCX6Q7L4S7 300 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 SETD3Q86TU7 594 aaPredicted RBP8.4□□□□□ -1.06
RDH11-205ENST00000553816 SLC41A1Q8IVJ1 513 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 TMEFF1Q8IYR6 380 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 KIAA2013Q8IYS2 634 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 STK40Q8N2I9 435 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 SH2D3CQ8N5H7 860 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 NETO2Q8NC67 525 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 FRS2Q8WU20 508 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 TBC1D31Q96DN5 1066 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 SIPA1Q96FS4 1042 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 MRFAP1L1Q96HT8 127 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 KCTD15Q96SI1 283 aaPredicted RBP8.4□□□□□ -1.06
RDH11-205ENST00000553816 FAM129BQ96TA1 746 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 HINFPQ9BQA5 517 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 KLC2Q9H0B6 622 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 MRPL47Q9HD33 250 aaKnown RBP8.4□□□□□ -1.06
RDH11-205ENST00000553816 OSGEPQ9NPF4 335 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 ITM2CQ9NQX7 267 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 TMEM51Q9NW97 253 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 TMEM248Q9NWD8 314 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 USP36Q9P275 1121 aaKnown RBP8.4□□□□□ -1.06
RDH11-205ENST00000553816 SUN2Q9UH99 717 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 VPS51Q9UID3 782 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 ANAPC7Q9UJX3 599 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 RAB23Q9ULC3 237 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 AP4E1Q9UPM8 1137 aa8.4□□□□□ -1.06
RDH11-205ENST00000553816 SDK1Q7Z5N4 2213 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 PCDH15Q96QU1 1955 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ATXN2Q99700 1313 aaKnown RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 EDDM13A0A1B0GTR0 161 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ILVBLA1L0T0 632 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 PATE3B3GLJ2 98 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 PLK4O00444 970 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ATP9BO43861 1147 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 AKR1B10O60218 316 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ZNF821O75541 412 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 RNF8O76064 485 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 RETP07949 1114 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 GOT1P17174 413 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 DHPSP49366 369 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 METAP1P53582 386 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ST8SIA6P61647 398 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 SLC25A11Q02978 314 aaKnown RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 GNA12Q03113 381 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 SULT2A1Q06520 285 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 DLG2Q15700 870 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 SMTNL2Q2TAL5 461 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ATP13A4Q4VNC1 1196 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 C6orf118Q5T5N4 469 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ACBD5Q5T8D3 534 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 Q6ZVU0 165 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 FAM124AQ86V42 546 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 CNGA4Q8IV77 575 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 MMAAQ8IVH4 418 aaKnown RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 TP53INP2Q8IXH6 220 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 KDM1BQ8NB78 822 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ZNF564Q8TBZ8 553 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 PRCCQ92733 491 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 ARHGEF2Q92974 986 aaKnown RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 SPACA7Q96KW9 195 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 SPON2Q9BUD6 331 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 ACE2Q9BYF1 805 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 DHX35Q9H5Z1 703 aaKnown RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 RXFP3Q9NSD7 469 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 TMEM74BQ9NUR3 256 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 WSB2Q9NYS7 404 aaPredicted RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 SERGEFQ9UGK8 458 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 SLC25A13Q9UJS0 675 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 GMEB2Q9UKD1 530 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 SARDHQ9UL12 918 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 USP18Q9UMW8 372 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 TFR2Q9UP52 801 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 MFHAS1Q9Y4C4 1052 aa8.39□□□□□ -1.07
RDH11-205ENST00000553816 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.39□□□□□ -1.07
RDH11-205ENST00000553816 PI4KAP42356 2102 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 LRRK1Q38SD2 2015 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 BCLAF3A2AJT9 711 aaKnown RBP8.38□□□□□ -1.07
RDH11-205ENST00000553816 TARSL2A2RTX5 802 aaKnown RBP8.38□□□□□ -1.07
RDH11-205ENST00000553816 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 CBX4O00257 560 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 EEF2KO00418 725 aaKnown RBP8.38□□□□□ -1.07
RDH11-205ENST00000553816 MID1O15344 667 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 BNIP3LO60238 219 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 PRPSAP2O60256 369 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 ZNF217O75362 1048 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 RHOBTB1O94844 696 aa8.38□□□□□ -1.07
RDH11-205ENST00000553816 IGLV3-19P01714 112 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms