RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 ARHGAP12Q8IWW6 846 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 CFAP52Q8N1V2 620 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 FAM71DQ8N9W8 422 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 USP13Q92995 863 aaPredicted RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 CABS1Q96KC9 395 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 WDR83Q9BRX9 315 aaKnown RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 PPCSQ9HAB8 311 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 USP29Q9HBJ7 922 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 TMEM248Q9NWD8 314 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 DOCK8Q8NF50 2099 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 TSPAN3O60637 253 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 BANF1O75531 89 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 VAV1P15498 845 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 RBL1P28749 1068 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 IFNAR2P48551 515 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 USP4Q13107 963 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 XRCC4Q13426 336 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 ADAM15Q13444 863 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 C5orf22Q49AR2 442 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 SLC45A4Q5BKX6 768 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 HP1BP3Q5SSJ5 553 aaPredicted RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 FAM182AQ5T1J6 154 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 BZW1Q7L1Q6 419 aaKnown RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 GET4Q7L5D6 327 aaPredicted RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 CDKL3Q8IVW4 592 aaPredicted RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 BBS7Q8IWZ6 715 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 CCDC197Q8NCU1 140 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 RTP4Q96DX8 246 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 FAM161BQ96MY7 647 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 LGMNQ99538 433 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 VPS37BQ9H9H4 285 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 KCNK9Q9NPC2 374 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 TDP1Q9NUW8 608 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 CLEC1BQ9P126 229 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 FETUBQ9UGM5 382 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 SLC24A2Q9UI40 661 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
ABCD4-219ENST00000553745 ZFP37Q9Y6Q3 630 aaPredicted RBP14.39□□□□□ -0.11
ABCD4-219ENST00000553745 BCLAF3A2AJT9 711 aaKnown RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 SOBPA7XYQ1 873 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 GOLGA8MH3BSY2 632 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 PPP1R12AO14974 1030 aaPredicted RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 TSHRP16473 764 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 FSHRP23945 695 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 DLX2Q07687 328 aaPredicted RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 GALNT2Q10471 571 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 KCNJ11Q14654 390 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 LRRC14Q15048 493 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 PDK1Q15118 436 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 PRKD1Q15139 912 aaPredicted RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 TMED2Q15363 201 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 LACTB2Q53H82 288 aaPredicted RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 RABGAP1LQ5R372 815 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 HTR3DQ70Z44 454 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 NPAS3Q8IXF0 933 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 FAM217AQ8IXS0 508 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 SRRM1Q8IYB3 904 aaKnown RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 DEPDC1BQ8WUY9 529 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 TFB1MQ8WVM0 346 aaKnown RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 DDX50Q9BQ39 737 aaKnown RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 ZMYM5Q9UJ78 669 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 RAD54BQ9Y620 910 aa14.38□□□□□ -0.11
ABCD4-219ENST00000553745 KIF26AQ9ULI4 1882 aaPredicted RBP14.38□□□□□ -0.11
ABCD4-219ENST00000553745 HACD1B0YJ81 288 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 KCNN4O15554 427 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 SLC18A1P54219 525 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 AP1B1Q10567 949 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 ITIH4Q14624 930 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 ZNF77Q15935 545 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 RNF187Q5TA31 235 aaPredicted RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 ANKMY2Q8IV38 441 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 ANKRD42Q8N9B4 389 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 ZSCAN18Q8TBC5 510 aaPredicted RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 MGARPQ8TDB4 240 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 DENND1AQ8TEH3 1009 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 CCT6BQ92526 530 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 HDAC11Q96DB2 347 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 LRCH3Q96II8 777 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 DHRS4Q9BTZ2 278 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 SLC39A8Q9C0K1 460 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 CLDND1Q9NY35 253 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 MYOFQ9NZM1 2061 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 RASA4BC9J798 803 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 POC1B-GALNT4F8VUJ3 575 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 DFFAO00273 331 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 GFRA2O00451 464 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 PRPF4O43172 522 aaKnown RBP eCLIP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 RASA4O43374 803 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 IGFBP4P22692 258 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 PPIDQ08752 370 aaKnown RBP14.37□□□□□ -0.11
ABCD4-219ENST00000553745 CTC1Q2NKJ3 1217 aa14.37□□□□□ -0.11
ABCD4-219ENST00000553745 AFMIDQ63HM1 303 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms