RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 A0A1W2PQH9 124 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 FAM170AA1A519 330 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF487B1APH4 448 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 PGRMC1O00264 195 aaKnown RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 GRM6O15303 877 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ADAM12O43184 909 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 DAPK3O43293 454 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CLASP2O75122 1294 aaKnown RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 LRCH4O75427 683 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 GJB6O95452 261 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 APOEP02649 317 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 PF4P02776 101 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TUBBP07437 444 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 POU2F2P09086 479 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 MYOGP15173 224 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 MCM3P25205 808 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 DDX6P26196 483 aaKnown RBP eCLIP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TPP2P29144 1249 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CCR1P32246 355 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 HTR7P34969 479 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ADRA1BP35368 520 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 HCAR3P49019 387 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 GPR15P49685 360 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TUBP50607 506 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CLCN4P51793 760 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TERF1P54274 439 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CACNA2D1P54289 1103 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CDH6P55285 790 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TBX4P57082 545 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 AMPD2Q01433 879 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 OGDHQ02218 1023 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TWF1Q12792 350 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 NME3Q13232 169 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TFDP2Q14188 446 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 KRT81Q14533 505 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 PPP2R5DQ14738 602 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TAF5Q15542 800 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 LONRF2Q1L5Z9 754 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 C15orf59Q2T9L4 293 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 GLE1Q53GS7 698 aaKnown RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ARHGAP15Q53QZ3 475 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 C10orf120Q5SQS8 335 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 SDHAF4Q5VUM1 108 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 MSANTD2Q6P1R3 559 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 KLHDC10Q6PID8 442 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 LRRC31Q6UY01 552 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 DNAJC14Q6Y2X3 702 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 BNC2Q6ZN30 1099 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 GPRIN1Q7Z2K8 1008 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 MAATS1Q7Z4T9 603 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CMASQ8NFW8 434 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ABHD4Q8TB40 342 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CLEC4CQ8WTT0 213 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 AUTS2Q8WXX7 1259 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ARNTL2Q8WYA1 636 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CASP10Q92851 521 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 AZIN2Q96A70 460 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 NTAN1Q96AB6 310 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TIFAQ96CG3 184 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 MRPL38Q96DV4 380 aaKnown RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 Q96M66 194 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TMEM74Q96NL1 305 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 HAPLN3Q96S86 360 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 FERMT1Q9BQL6 677 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 DCLK3Q9C098 648 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 NACA2Q9H009 215 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 OSBPL2Q9H1P3 480 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 FAM204AQ9H8W3 233 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ZWILCHQ9H900 591 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ASAH2Q9NR71 780 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 TMEM30AQ9NV96 361 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 DDIT4Q9NX09 232 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ZDHHC7Q9NXF8 308 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 RCOR3Q9P2K3 495 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 PCSK1NQ9UHG2 260 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 FZD10Q9ULW2 581 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 PACSIN2Q9UNF0 486 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 NAALADL1Q9UQQ1 740 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF510Q9Y2H8 683 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 YBX2Q9Y2T7 364 aaKnown RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 HBS1LQ9Y450 684 aaKnown RBP5.18□□□□□ -1.58
VTI1B-202ENST00000553619 YIPF1Q9Y548 306 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 CLUHO75153 1309 aa5.18□□□□□ -1.58
VTI1B-202ENST00000553619 GBF1Q92538 1859 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SYNJ2BP-COX16A0A087WUM0 186 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 LRRD1A4D1F6 860 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HIDE1A8MVS5 230 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 EFCAB8A8MWE9 144 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 KRIT1O00522 736 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 NDC80O14777 642 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 IRAK2O43187 625 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 TLR5O60602 858 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SRGAP2O75044 1071 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 VNN2O95498 520 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 FGGP02679 453 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ZDHHC11BP0C7U3 371 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SPATA31D3P0C874 917 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms