RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 KLC2Q9H0B6 622 aa23.3■■□□□ 1.32
TDP1-206ENST00000553569 TNKS2Q9H2K2 1166 aa23.3■■□□□ 1.32
TDP1-206ENST00000553569 GRPEL1Q9HAV7 217 aa23.3■■□□□ 1.32
TDP1-206ENST00000553569 FCF1Q9Y324 198 aaKnown RBP23.3■■□□□ 1.32
TDP1-206ENST00000553569 REXO2Q9Y3B8 237 aaKnown RBP23.3■■□□□ 1.32
TDP1-206ENST00000553569 MFHAS1Q9Y4C4 1052 aa23.3■■□□□ 1.32
TDP1-206ENST00000553569 HYOU1Q9Y4L1 999 aa23.3■■□□□ 1.32
TDP1-206ENST00000553569 NUP205Q92621 2012 aa23.3■■□□□ 1.32
TDP1-206ENST00000553569 SDK1Q7Z5N4 2213 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 GOLGA6L3A6NEY3 463 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 RHOBTB1O94844 696 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 KRT7P08729 469 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 CD48P09326 243 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 AMPD1P23109 780 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 GSDMDP57764 484 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 RPL6Q02878 288 aaKnown RBP23.29■■□□□ 1.32
TDP1-206ENST00000553569 MMRN1Q13201 1228 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 ELAVL3Q14576 367 aaKnown RBP23.29■■□□□ 1.32
TDP1-206ENST00000553569 TCEAL1Q15170 157 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 TTC31Q49AM3 519 aaPredicted RBP23.29■■□□□ 1.32
TDP1-206ENST00000553569 PMS2CLQ68D20 193 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 ARMCX6Q7L4S7 300 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 METTL3Q86U44 580 aaKnown RBP23.29■■□□□ 1.32
TDP1-206ENST00000553569 TMEFF1Q8IYR6 380 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 DEFB119Q8N690 84 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 NPWQ8N729 165 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 OR8D1Q8WZ84 308 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 ZC3H10Q96K80 434 aaKnown RBP23.29■■□□□ 1.32
TDP1-206ENST00000553569 FAM129BQ96TA1 746 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 LRRC19Q9H756 370 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 ITM2CQ9NQX7 267 aa23.29■■□□□ 1.32
TDP1-206ENST00000553569 GPR179Q6PRD1 2367 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 CEP192Q8TEP8 1941 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 RCCD1A6NED2 376 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 MID1O15344 667 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 BUB1O43683 1085 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 KDELR3O43731 214 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 IL1BP01584 269 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 TNNT1P13805 278 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 CD6P30203 668 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 DHPSP49366 369 aaPredicted RBP23.28■■□□□ 1.32
TDP1-206ENST00000553569 NDST2P52849 883 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 GEMIN4P57678 1058 aaKnown RBP23.28■■□□□ 1.32
TDP1-206ENST00000553569 SERINC3Q13530 473 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 CST6Q15828 149 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 SLC36A4Q6YBV0 504 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 LPCAT2Q7L5N7 544 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 KCTD6Q8NC69 237 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 GANCQ8TET4 914 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 RUBCNQ92622 972 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 CCDC114Q96M63 670 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 CALN1Q9BXU9 219 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 SLC39A8Q9C0K1 460 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 PABPC3Q9H361 631 aaKnown RBP23.28■■□□□ 1.32
TDP1-206ENST00000553569 ETNK2Q9NVF9 386 aa23.28■■□□□ 1.32
TDP1-206ENST00000553569 ARHGAP42A6NI28 874 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 DFFAO00273 331 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 SPOPO43791 374 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 NDUFS2O75306 463 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 CD160O95971 181 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 DNA2P51530 1060 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 ZBTB16Q05516 673 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 SLC20A2Q08357 652 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 DPYSL3Q14195 570 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 TMCO3Q6UWJ1 677 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 KIAA1328Q86T90 577 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 DCLK2Q8N568 766 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 TSC1Q92574 1164 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 TOE1Q96GM8 510 aaKnown RBP23.27■■□□□ 1.32
TDP1-206ENST00000553569 DESI2Q9BSY9 194 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 CEP44Q9C0F1 390 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 GOLPH3Q9H4A6 298 aa23.27■■□□□ 1.32
TDP1-206ENST00000553569 A0A0A6YYK5 440 aaPredicted RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 ZSCAN5CA6NGD5 496 aaPredicted RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 BUB1BO60566 1050 aaPredicted RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 RETP07949 1114 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 COMTP21964 271 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 SLC8A1P32418 973 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 RECQLP46063 649 aaPredicted RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 PAPOLAP51003 745 aaKnown RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 ARSEP51690 589 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 POM121L1PQ3SYA9 428 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 DSG4Q86SJ6 1040 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 ARHGAP12Q8IWW6 846 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 PCDH20Q8N6Y1 951 aaKnown RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 OR2A12Q8NGT7 310 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 TM6SF2Q9BZW4 377 aa23.26■■□□□ 1.31
TDP1-206ENST00000553569 RCOR3Q9P2K3 495 aaPredicted RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 FARP1Q9Y4F1 1045 aaPredicted RBP23.26■■□□□ 1.31
TDP1-206ENST00000553569 A0A1W2PP55 124 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 TMCC1O94876 653 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 EPN2O95208 641 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 ADH1BP00325 375 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 IGLV3-19P01714 112 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 OXTRP30559 389 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 SLC1A1P43005 524 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 VAV2P52735 878 aa23.25■■□□□ 1.31
TDP1-206ENST00000553569 HADHBP55084 474 aaKnown RBP23.25■■□□□ 1.31
TDP1-206ENST00000553569 AFMIDQ63HM1 303 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms