RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 KDELR3O43731 214 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 RARAP10276 462 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 VAV1P15498 845 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 GOT1P17174 413 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 HOXD12P35452 270 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 CYLC1P35663 651 aaPredicted RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 ARHGAP25P42331 645 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 SMTNL2Q2TAL5 461 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 ACCSLQ4AC99 568 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 PPP6R3Q5H9R7 873 aaPredicted RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 KCNT1Q5JUK3 1230 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 PLA2G2CQ5R387 149 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 AFMIDQ63HM1 303 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 C22orf39Q6P5X5 142 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 LINGO4Q6UY18 593 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 Q6ZVU0 165 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 CACUL1Q86Y37 369 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 STK40Q8N2I9 435 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 DCLK2Q8N568 766 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 PCDH20Q8N6Y1 951 aaKnown RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 CADM4Q8NFZ8 388 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 SLC35G2Q8TBE7 412 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 FAM71BQ8TC56 605 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 OR8D1Q8WZ84 308 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 TOE1Q96GM8 510 aaKnown RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 OSGEPQ9NPF4 335 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 LUC7LQ9NQ29 371 aaKnown RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 CWC15Q9P013 229 aaKnown RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 CFAP54Q96N23 3096 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 RASA4BC9J798 803 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 K7ERQ8 282 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 RASA4O43374 803 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 SMAD6O43541 496 aaKnown RBP18.84■□□□□ 0.61
CPSF2-202ENST00000553427 CD160O95971 181 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 C5AR1P21730 350 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 ARL4AP40617 200 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 HADHBP55084 474 aaKnown RBP18.84■□□□□ 0.61
CPSF2-202ENST00000553427 SERINC3Q13530 473 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 CSRP2Q16527 193 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 PEAR1Q5VY43 1037 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-202ENST00000553427 TXNRD3NBQ6F5E7 133 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 CYP2U1Q7Z449 544 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 POLNQ7Z5Q5 900 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 MMAAQ8IVH4 418 aaKnown RBP18.84■□□□□ 0.61
CPSF2-202ENST00000553427 PLPP6Q8IY26 295 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 TMEFF1Q8IYR6 380 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 LZTR1Q8N653 840 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 OR2A12Q8NGT7 310 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 CASKIN2Q8WXE0 1202 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 TSC1Q92574 1164 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 FOXJ1Q92949 421 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 FAM131CQ96AQ9 280 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 HMCESQ96FZ2 354 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 ZNF419Q96HQ0 510 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-202ENST00000553427 KLC2Q9H0B6 622 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 SGK2Q9HBY8 427 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 PCDH18Q9HCL0 1135 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 PARD6AQ9NPB6 346 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 FZD4Q9ULV1 537 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 SDK1Q7Z5N4 2213 aa18.84■□□□□ 0.61
CPSF2-202ENST00000553427 MID1O15344 667 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 DAPK3O43293 454 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 NDUFS2O75306 463 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 ZNF821O75541 412 aaPredicted RBP18.83■□□□□ 0.6
CPSF2-202ENST00000553427 ERCC2P18074 760 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 MPLP40238 635 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 PTGER3P43115 390 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 MAGEA1P43355 309 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 ARSEP51690 589 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 SPA17Q15506 151 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 INO80DQ53TQ3 878 aaPredicted RBP18.83■□□□□ 0.6
CPSF2-202ENST00000553427 FAM46CQ5VWP2 391 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 LYSMD4Q5XG99 296 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 HSPH1Q92598 858 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 CSPG4P5Q96PW8 444 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 ARRDC1-AS1Q9H2J1 176 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 VPS45Q9NRW7 570 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 SEMA4GQ9NTN9 838 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 PPM1HQ9ULR3 514 aa18.83■□□□□ 0.6
CPSF2-202ENST00000553427 FARP1Q9Y4F1 1045 aaPredicted RBP18.83■□□□□ 0.6
CPSF2-202ENST00000553427 A0A0A6YYK5 440 aaPredicted RBP18.82■□□□□ 0.6
CPSF2-202ENST00000553427 C1QTNF3-AMACRE9PGA6 284 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 NDUFA10O95299 355 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 KRT7P08729 469 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 ZNF806P0C7X5 589 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 SLC8A1P32418 973 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 PSMD8P48556 350 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 DHPSP49366 369 aaPredicted RBP18.82■□□□□ 0.6
CPSF2-202ENST00000553427 SPEM2Q0P670 501 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 ARHGAP12Q8IWW6 846 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 BTBD1Q9H0C5 482 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 FBXL12Q9NXK8 326 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 NCKAP1Q9Y2A7 1128 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 PCDHA13Q9Y5I0 950 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 EPN1Q9Y6I3 576 aaPredicted RBP18.82■□□□□ 0.6
CPSF2-202ENST00000553427 THADAQ6YHU6 1953 aa18.82■□□□□ 0.6
CPSF2-202ENST00000553427 TNRC6BQ9UPQ9 1833 aaKnown RBP18.81■□□□□ 0.6
CPSF2-202ENST00000553427 ARHGAP42A6NI28 874 aa18.81■□□□□ 0.6
CPSF2-202ENST00000553427 SOWAHDA6NJG2 315 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms