RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ZNF189O75820 626 aaPredicted RBP17.85■□□□□ 0.45
SYNE3-202ENST00000553340 PGK2P07205 417 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 PSMC3P17980 439 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 PTPN3P26045 913 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 GRM5P41594 1212 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 OLFML2BQ68BL8 750 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 FBXO16Q8IX29 292 aaPredicted RBP17.85■□□□□ 0.45
SYNE3-202ENST00000553340 TMEM102Q8N9M5 508 aaPredicted RBP17.85■□□□□ 0.45
SYNE3-202ENST00000553340 TMA16Q96EY4 203 aaKnown RBP17.85■□□□□ 0.45
SYNE3-202ENST00000553340 SCYL1Q96KG9 808 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 HSFY1Q96LI6 401 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 SUDS3Q9H7L9 328 aaPredicted RBP17.85■□□□□ 0.45
SYNE3-202ENST00000553340 TMPRSS4Q9NRS4 437 aa17.85■□□□□ 0.45
SYNE3-202ENST00000553340 SYNJ2BP-COX16A0A087WUM0 186 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 HCRTO43612 131 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 DDHD2O94830 711 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 PDGFRBP09619 1106 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 NOL9Q5SY16 702 aaKnown RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 IRGQQ8WZA9 623 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 EME1Q96AY2 570 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 FAM210AQ96ND0 272 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 SLC2A11Q9BYW1 496 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 COX16Q9P0S2 106 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 MAGED2Q9UNF1 606 aaPredicted RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 ERI2A8K979 691 aaKnown RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 EEF2KO00418 725 aaKnown RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 RNASEH2AO75792 299 aaKnown RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 VAPBO95292 243 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 TXNP10599 105 aaKnown RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 NSUN2Q08J23 767 aaKnown RBP eCLIP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 PTK2BQ14289 1009 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 MYBPC3Q14896 1274 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 CERCAMQ5T4B2 595 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 PAOXQ6QHF9 649 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 PDZD4Q76G19 769 aaPredicted RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 APOBEC3FQ8IUX4 373 aaKnown RBP17.84■□□□□ 0.45
SYNE3-202ENST00000553340 TP53INP2Q8IXH6 220 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 TMEM151AQ8N4L1 468 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 LZICQ8WZA0 190 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 MARK4Q96L34 752 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 HAUS8Q9BT25 410 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 MCMBPQ9BTE3 642 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 SETD4Q9NVD3 440 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
SYNE3-202ENST00000553340 TRIM38O00635 465 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 TCN1P20061 433 aaPredicted RBP17.83■□□□□ 0.44
SYNE3-202ENST00000553340 SAT1P21673 171 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 DPYSQ14117 519 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 GRM3Q14832 879 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 LRRC52Q8N7C0 313 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 GPR22Q99680 433 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 NPAS2Q99743 824 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 C1QTNF1Q9BXJ1 281 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 DERAQ9Y315 318 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 COPG1Q9Y678 874 aaKnown RBP17.83■□□□□ 0.44
SYNE3-202ENST00000553340 PFDN1O60925 122 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 TRMUO75648 421 aaKnown RBP17.83■□□□□ 0.44
SYNE3-202ENST00000553340 SBK3P0C264 359 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 CDK4P11802 303 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 GLRBP48167 497 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 NPY2RP49146 381 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 USP10Q14694 798 aaKnown RBP17.83■□□□□ 0.44
SYNE3-202ENST00000553340 KIZQ2M2Z5 673 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 AMIGO2Q86SJ2 522 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 CRYBG2Q8N1P7 616 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 ITFG2Q969R8 447 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 CXCL16Q9H2A7 254 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 PLEKHA5Q9HAU0 1116 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 CHRAC1Q9NRG0 131 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 ADA2Q9NZK5 511 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 RUVBL2Q9Y230 463 aaKnown RBP17.83■□□□□ 0.44
SYNE3-202ENST00000553340 GMEB1Q9Y692 573 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 AK5Q9Y6K8 562 aa17.83■□□□□ 0.44
SYNE3-202ENST00000553340 TCAF2A6NFQ2 919 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 H0YJX3 145 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 H3BSA7 217 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 DCLK1O15075 740 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 JUNP05412 331 aaKnown RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 CYP2C9P11712 490 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 ZNF26P17031 533 aaPredicted RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 CDH2P19022 906 aaPredicted RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 SLC5A2P31639 672 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 MGAT5BQ3V5L5 792 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 KCTD11Q693B1 232 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 LINC01465Q8N7H1 131 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 STYXQ8WUJ0 223 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 ASB9Q96DX5 294 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 ZMAT2Q96NC0 199 aaKnown RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 MRPL40Q9NQ50 206 aaKnown RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 NSMCE4AQ9NXX6 385 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 TUBGCP4Q9UGJ1 667 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 ZSWIM8A7E2V4 1837 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 PHGDHO43175 533 aaKnown RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 DAB1O75553 588 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 PCSK6P29122 969 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 CSRP3P50461 194 aa17.82■□□□□ 0.44
SYNE3-202ENST00000553340 PITX1P78337 314 aaPredicted RBP17.82■□□□□ 0.44
SYNE3-202ENST00000553340 IL23RQ5VWK5 629 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms