RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PRR11Q96HE9 360 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-218ENST00000553309 ZBTB26Q9HCK0 441 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 TMOD4Q9NZQ9 345 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 TSPYL4Q9UJ04 414 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 BRWD1Q9NSI6 2320 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
ATXN3-218ENST00000553309 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
ATXN3-218ENST00000553309 ZNF521Q96K83 1311 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 A0A087WZ62 844 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 PPEF2O14830 753 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 HTATSF1O43719 755 aaKnown RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 MOSPD3O75425 235 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 WDR47O94967 919 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TOP3BO95985 862 aaKnown RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TPM2P07951 284 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 FGFR2P21802 821 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TXNL4AP83876 142 aaKnown RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 SLC20A2Q08357 652 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TCP10Q12799 353 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 MTAPQ13126 283 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 ACOX1Q15067 660 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 EPHA10Q5JZY3 1008 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TMTC4Q5T4D3 741 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 CRTC1Q6UUV9 634 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 BEND5Q7L4P6 421 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 ASCL5Q7RTU5 278 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 GLCCI1Q86VQ1 547 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 RNF152Q8N8N0 203 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TRPV1Q8NER1 839 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 MAP4K1Q92918 833 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 KAZALD1Q96I82 304 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 MYD88Q99836 296 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 CINPQ9BW66 212 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 MAGEB5Q9BZ81 275 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 SPRTNQ9H040 489 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 VPS16Q9H269 839 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 YY1AP1Q9H869 796 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TUBA8Q9NY65 449 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-218ENST00000553309 TMOD2Q9NZR1 351 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 ZNF112Q9UJU3 913 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 MAFFQ9ULX9 164 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 AGTPBP1Q9UPW5 1226 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 SLC45A1Q9Y2W3 748 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 CACNA1HO95180 2353 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 ACACBO00763 2458 aa5.52□□□□□ -1.53
ATXN3-218ENST00000553309 GBF1Q92538 1859 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 FAM186AA6NE01 2351 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 DCHS1Q96JQ0 3298 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 CLCA1A8K7I4 914 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 CCNT2O60583 730 aaKnown RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PRAMEF2O60811 474 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PCCAP05165 728 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 TMIGD3P0DMS9 266 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 TRIM27P14373 513 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PTGER1P34995 402 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 IGHMBP2P38935 993 aaKnown RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PBX1P40424 430 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 RGS2P41220 211 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 FKBP1AP62942 108 aaKnown RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 CHRNDQ07001 517 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 CCDC15Q0P6D6 951 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 IFIT5Q13325 482 aaKnown RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 SLC14A1Q13336 389 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 DNASE1L3Q13609 305 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 RABEP1Q15276 862 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 SEC23BQ15437 767 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 Q4G0T1 1027 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 FAXCQ5TGI0 409 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PXDC1Q5TGL8 231 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 CASC1Q6TDU7 716 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 ATOH1Q92858 354 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-218ENST00000553309 ADGRE3Q9BY15 652 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 ANKRD2Q9GZV1 360 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 VPS45Q9NRW7 570 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 ELOVL5Q9NYP7 299 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 MYO1AQ9UBC5 1043 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 AFG3L2Q9Y4W6 797 aa5.51□□□□□ -1.53
ATXN3-218ENST00000553309 PTPRFP10586 1907 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 E5RJQ4 531 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 APOL1O14791 398 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 PMM2O15305 246 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 CSF2RAP15509 400 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 TSHRP16473 764 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 CHAF1AQ13111 956 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-218ENST00000553309 PFKFB3Q16875 520 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-218ENST00000553309 MFSD14CQ5VZR4 134 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 ABLIM2Q6H8Q1 611 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 EXOC8Q8IYI6 725 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 SCYL3Q8IZE3 742 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 NANOGP1Q8N7R0 232 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 SLC44A5Q8NCS7 719 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-218ENST00000553309 USP6NLQ92738 828 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 HIC2Q96JB3 615 aa5.5□□□□□ -1.53
ATXN3-218ENST00000553309 ZC3H10Q96K80 434 aaKnown RBP5.5□□□□□ -1.53
ATXN3-218ENST00000553309 FCRL4Q96PJ5 515 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms