RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTCH1-227ENST00000553256 GJB3O75712 270 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 ADH1BP00325 375 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 ENGP17813 658 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 IL1R2P27930 398 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 MIPP30301 263 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 NNMTP40261 264 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 SERPINH1P50454 418 aaKnown RBP19.71■□□□□ 0.75
PTCH1-227ENST00000553256 GALCP54803 685 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 TBX2Q13207 712 aaPredicted RBP19.71■□□□□ 0.75
PTCH1-227ENST00000553256 TTC31Q49AM3 519 aaPredicted RBP19.71■□□□□ 0.75
PTCH1-227ENST00000553256 TDRD12Q587J7 1177 aaKnown RBP19.71■□□□□ 0.75
PTCH1-227ENST00000553256 EFHC2Q5JST6 749 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 WDR45BQ5MNZ6 344 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 SARM1Q6SZW1 724 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 BIRC7Q96CA5 298 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 ARHGEF26Q96DR7 871 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 TRIM11Q96F44 468 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 MAGEH1Q9H213 219 aa19.71■□□□□ 0.75
PTCH1-227ENST00000553256 ASCC3Q8N3C0 2202 aaKnown RBP19.7■□□□□ 0.74
PTCH1-227ENST00000553256 DCDC2BA2VCK2 349 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 ANKRD62A6NC57 917 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 RNASEH1O60930 286 aaKnown RBP19.7■□□□□ 0.74
PTCH1-227ENST00000553256 TCF4P15884 667 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 GOT1P17174 413 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 PSMD8P48556 350 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 SLC20A2Q08357 652 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 MAPK8IP2Q13387 824 aaPredicted RBP19.7■□□□□ 0.74
PTCH1-227ENST00000553256 AGBL4Q5VU57 503 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 RWDD4Q6NW29 188 aaKnown RBP19.7■□□□□ 0.74
PTCH1-227ENST00000553256 SCYL2Q6P3W7 929 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 C22orf39Q6P5X5 142 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 ALKBH5Q6P6C2 394 aaKnown RBP19.7■□□□□ 0.74
PTCH1-227ENST00000553256 UMODL1-AS1Q8N2C9 162 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 NIPA2Q8N8Q9 360 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 CHST14Q8NCH0 376 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 SNRNP25Q9BV90 132 aaKnown RBP19.7■□□□□ 0.74
PTCH1-227ENST00000553256 CEP44Q9C0F1 390 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 LRRC19Q9H756 370 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 ATP13A1Q9HD20 1204 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 GPATCH2LQ9NWQ4 482 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 DNAI1Q9UI46 699 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 SCINQ9Y6U3 715 aa19.7■□□□□ 0.74
PTCH1-227ENST00000553256 C4orf47A7E2U8 309 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 CBFA2T2O43439 604 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 EPHB2P29323 1055 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 HTR7P34969 479 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 PCK1P35558 622 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 ADPRHP54922 357 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 TAS2R38P59533 333 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 SYCP2LQ5T4T6 812 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 DAB2IPQ5VWQ8 1189 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 AFMIDQ63HM1 303 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 DGLUCYQ7Z3D6 616 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 RABEPKQ7Z6M1 372 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 PSTKQ8IV42 348 aaKnown RBP19.69■□□□□ 0.74
PTCH1-227ENST00000553256 PLPP6Q8IY26 295 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 ATP11CQ8NB49 1132 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 ISG20Q96AZ6 181 aaKnown RBP19.69■□□□□ 0.74
PTCH1-227ENST00000553256 KCTD15Q96SI1 283 aaPredicted RBP19.69■□□□□ 0.74
PTCH1-227ENST00000553256 SPON2Q9BUD6 331 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 EIF2B4Q9UI10 523 aaKnown RBP19.69■□□□□ 0.74
PTCH1-227ENST00000553256 WASF2Q9Y6W5 498 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 KNL1Q8NG31 2342 aa19.69■□□□□ 0.74
PTCH1-227ENST00000553256 A0A1B0GTW7 788 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 EIF3CLB5ME19 914 aaKnown RBP19.68■□□□□ 0.74
PTCH1-227ENST00000553256 CBX4O00257 560 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 PLK4O00444 970 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 ARHGAP33O14559 1287 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 KDELR3O43731 214 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 IL1BP01584 269 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 EIF4A3P38919 411 aaKnown RBP19.68■□□□□ 0.74
PTCH1-227ENST00000553256 TRIM14Q14142 442 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 ACAP1Q15027 740 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 ACCSLQ4AC99 568 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 ERMARDQ5T6L9 678 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 KIAA0895LQ68EN5 471 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 RETSATQ6NUM9 610 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 NCEH1Q6PIU2 408 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 DPY19L3Q6ZPD9 716 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 HDDC3Q8N4P3 179 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 ZCCHC9Q8N567 271 aaKnown RBP19.68■□□□□ 0.74
PTCH1-227ENST00000553256 TMIEQ8NEW7 156 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 OR8K1Q8NGG5 319 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 PIP4K2CQ8TBX8 421 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 OR8D1Q8WZ84 308 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 EIF3CQ99613 913 aaKnown RBP19.68■□□□□ 0.74
PTCH1-227ENST00000553256 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.68■□□□□ 0.74
PTCH1-227ENST00000553256 MRPL47Q9HD33 250 aaKnown RBP19.68■□□□□ 0.74
PTCH1-227ENST00000553256 TMEM9BQ9NQ34 198 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 MYO1AQ9UBC5 1043 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 SUSD2Q9UGT4 822 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 AP4E1Q9UPM8 1137 aa19.68■□□□□ 0.74
PTCH1-227ENST00000553256 SSU72P8A0A1W2PR75 194 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 MED19A0JLT2 244 aaPredicted RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 SLC7A4O43246 635 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 LATO43561 262 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 PLRG1O43660 514 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 RAMP2O60895 175 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 MFAP3LO75121 409 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms