RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 STYXL1Q9Y6J8 313 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 DENND4CQ5VZ89 1909 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 A8MXQ7 604 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 STMND1H3BQB6 276 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 MUSKO15146 869 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 MID1O15344 667 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SLC7A4O43246 635 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 JAK2O60674 1132 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 MMP20O60882 483 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 STC2O76061 302 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 PRPF6O94906 941 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ATE1O95260 518 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 CLDN1O95832 211 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ASLP04424 464 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TMEM191BP0C7N4 346 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SLFN14P0C7P3 912 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 GIMD1P0DJR0 217 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 RARGP13631 454 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 CPA1P15085 419 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TRIM21P19474 475 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 AKT2P31751 481 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 CCKBRP32239 447 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 NNMTP40261 264 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SLC19A1P41440 591 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 LEPRP48357 1165 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SLC5A3P53794 718 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 NCKAP1LP55160 1127 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 POU4F2Q12837 409 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SRSF6Q13247 344 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SURF1Q15526 300 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF174Q15697 407 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 DUOXA2Q1HG44 320 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 EIF2S3LQ2VIR3 472 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 HNRNPA1L2Q32P51 320 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ZC3H12BQ5HYM0 836 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 FAM46CQ5VWP2 391 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TMEM215Q68D42 235 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SP5Q6BEB4 398 aaPredicted RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 NEK5Q6P3R8 708 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 BNC2Q6ZN30 1099 aaPredicted RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 REC114Q7Z4M0 266 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TRIM69Q86WT6 500 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 LSRQ86X29 649 aaPredicted RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 CCDC117Q8IWD4 279 aaPredicted RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TP53INP2Q8IXH6 220 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF366Q8N895 744 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 OR6C4Q8NGE1 309 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 FBXO27Q8NI29 283 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 BTN2A2Q8WVV5 523 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 USP7Q93009 1102 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 PLD4Q96BZ4 506 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 HDAC11Q96DB2 347 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 P2RY11Q96G91 374 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ANKRD36BP1Q96IX9 119 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TNIP3Q96KP6 325 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 C5orf34Q96MH7 638 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 GFM1Q96RP9 751 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 B3GNT5Q9BYG0 378 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 SLC29A3Q9BZD2 475 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 TNKS2Q9H2K2 1166 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 DMAP1Q9NPF5 467 aaPredicted RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 BRD7Q9NPI1 651 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 DNAJC28Q9NX36 388 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ARHGAP20Q9P2F6 1191 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 CYTH4Q9UIA0 394 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ITGB1BP2Q9UKP3 347 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 PADI4Q9UM07 663 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ENTPD4Q9Y227 616 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ATP8A1Q9Y2Q0 1164 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 HS3ST3A1Q9Y663 406 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 FBN3Q75N90 2809 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 UTP20O75691 2785 aaKnown RBP5.35□□□□□ -1.55
CKAP4-203ENST00000553039 ESPL1Q14674 2120 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 CITO14578 2027 aa5.35□□□□□ -1.55
CKAP4-203ENST00000553039 LY6G6EA0A0G2JKS1 128 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 PRAMEF33A0A0G2JMD5 474 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 EDDM13A0A1B0GTR0 161 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 PMS2P1A4D2B8 440 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 C10orf142B7Z368 130 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 NTN3O00634 580 aaPredicted RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 AQP9O43315 295 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 HCRTO43612 131 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 PRAMEF10O60809 474 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 SIN3BO75182 1162 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 FAM155BO75949 473 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 MAP3K6O95382 1288 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 IL1BP01584 269 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 TNNC2P02585 160 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 KLKB1P03952 638 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 C4BPAP04003 597 aaKnown RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 PABPC1P11940 636 aaKnown RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 MAT2AP31153 395 aaKnown RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 RECQLP46063 649 aaPredicted RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 NOP2P46087 812 aaKnown RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 UQCRFS1P47985 274 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 MAPK10P53779 464 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ADPRHP54922 357 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 GTF2BQ00403 316 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 STK3Q13188 491 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms