RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CEACAM7Q14002 265 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 EPGNQ6UW88 154 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 LAYNQ6UX15 382 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 CYP2R1Q6VVX0 501 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 TLK2Q86UE8 772 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 ACMSDQ8TDX5 336 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 SGF29Q96ES7 293 aa12.58□□□□□ -0.39
HDAC7-230ENST00000552960 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.39
HDAC7-230ENST00000552960 MRPS26Q9BYN8 205 aaKnown RBP12.58□□□□□ -0.39
HDAC7-230ENST00000552960 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 RGSL1A5PLK6 1076 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 UNCXA6NJT0 531 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 TRIM13O60858 407 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PIGNO95427 931 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 TPH1P17752 444 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 TPSB2P20231 275 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 RPL10P27635 214 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 ADORA2BP29275 332 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 MAGEA3P43357 314 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 SLC26A2P50443 739 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 TPSAB1Q15661 275 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 SEL1L3Q68CR1 1132 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 FSTL4Q6MZW2 842 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 MYO1HQ8N1T3 1032 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 CCDC185Q8N715 623 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 TMEM40Q8WWA1 233 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 NDRG1Q92597 394 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 RTP4Q96DX8 246 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 OSMRQ99650 979 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 BCO2Q9BYV7 579 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PCDHAC1Q9H158 963 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 HESX1Q9UBX0 185 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 GABRQQ9UN88 632 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 DMTF1Q9Y222 760 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 SNX13Q9Y5W8 968 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 MGAMO43451 1857 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 DENRO43583 198 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 IMPDH2P12268 514 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 ME2P23368 584 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 IFRD2Q12894 506 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 DGKDQ16760 1214 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 PDCD6IPQ8WUM4 868 aaKnown RBP12.58□□□□□ -0.4
HDAC7-230ENST00000552960 CERS2Q96G23 380 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 CSPG4P5Q96PW8 444 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 NMRAL1Q9HBL8 299 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 GJD2Q9UKL4 321 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
HDAC7-230ENST00000552960 KPNA7A9QM74 516 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 TREHO43280 583 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 HCRTO43612 131 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 B4GALT4O60513 344 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SEC24DO94855 1032 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 PGAM1P18669 254 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ARL4AP40617 200 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 HARS2P49590 506 aaKnown RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 CDH15P55291 814 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 NIPAL4Q0D2K0 466 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 DCTN2Q13561 401 aaKnown RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ZBTB46Q86UZ6 589 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 TRPV1Q8NER1 839 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ACVR1CQ8NER5 493 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 MFSD3Q96ES6 412 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF670Q9BS34 389 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 UBP1Q9NZI7 540 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 RAB26Q9ULW5 256 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 BARX2Q9UMQ3 279 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 A0A0A0MRY4 1105 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 FOXD2O60548 495 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 C2P06681 752 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SMIM10L2AP0DMW4 78 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SMIM10L2BP0DMW5 78 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 FUT4P22083 530 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SLC6A3Q01959 620 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SEMA5AQ13591 1074 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ARL13AQ5H913 290 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 IL23RQ5VWK5 629 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 IL31Q6EBC2 164 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 LRRC8BQ6P9F7 803 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SPNS2Q8IVW8 549 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 TSPAN14Q8NG11 270 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 ARNTL2Q8WYA1 636 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 SPATA13Q96N96 652 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 KLHL32Q96NJ5 620 aa12.57□□□□□ -0.4
HDAC7-230ENST00000552960 FCRL3Q96P31 734 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-230ENST00000552960 KCTD15Q96SI1 283 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms