RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ACDQ96AP0 544 aa10.19□□□□□ -0.78
LETMD1-234ENST00000552645 SPON2Q9BUD6 331 aa10.19□□□□□ -0.78
LETMD1-234ENST00000552645 GOLPH3Q9H4A6 298 aa10.19□□□□□ -0.78
LETMD1-234ENST00000552645 SLC24A3Q9HC58 644 aa10.19□□□□□ -0.78
LETMD1-234ENST00000552645 PPARGC1AQ9UBK2 798 aaKnown RBP10.19□□□□□ -0.78
LETMD1-234ENST00000552645 SLC8A2Q9UPR5 921 aa10.19□□□□□ -0.78
LETMD1-234ENST00000552645 DUSP10Q9Y6W6 482 aa10.19□□□□□ -0.78
LETMD1-234ENST00000552645 IGLV3-10A0A075B6K4 115 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 MACROD2A1Z1Q3 448 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SGK1O00141 431 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 TIMM44O43615 452 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SPOPO43791 374 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 DNAJC8O75937 253 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ATP5BP06576 529 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RARAP10276 462 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 GOT1P17174 413 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 NTSR1P30989 418 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 HOXC13P31276 330 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 PXNP49023 591 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 VAV2P52735 878 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 OXCT1P55809 520 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 TAS2R40P59535 323 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SLC25A11Q02978 314 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 DMC1Q14565 340 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 EIF4HQ15056 248 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ANGPT1Q15389 498 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 C5orf22Q49AR2 442 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ATP13A4Q4VNC1 1196 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 BOLA3Q53S33 107 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 C6orf118Q5T5N4 469 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SERPINA13PQ6UXR4 307 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CCDC121Q6ZUS5 278 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CYP4V2Q6ZWL3 525 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 TRMT11Q7Z4G4 463 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 NLRP14Q86W24 1093 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ZNF366Q8N895 744 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RPL10LQ96L21 214 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 HHIPQ96QV1 700 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 KCTD15Q96SI1 283 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 FEM1AQ9BSK4 669 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 LACRTQ9GZZ8 138 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 TRIM10Q9UDY6 481 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 INTS6Q9UL03 887 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 MMP17Q9ULZ9 603 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 HCN4Q9Y3Q4 1203 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RAD54BQ9Y620 910 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 A0A0D9SEW6 157 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 H0Y858 1186 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CBX4O00257 560 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 MGRN1O60291 552 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 BUB1BO60566 1050 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ADAM23O75077 832 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 MTA2O94776 668 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ATP1A1P05023 1023 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 DLDP09622 509 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 HOXB2P14652 356 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 PRLRP16471 622 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RHOQP17081 205 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 COMTP21964 271 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ARL4AP40617 200 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CCNHP51946 323 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CDH6P55285 790 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ST8SIA6P61647 398 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 NRG1Q02297 640 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ZNF234Q14588 700 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RBBP5Q15291 538 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 PLEKHG6Q3KR16 790 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ODF2Q5BJF6 829 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 EOGTQ5NDL2 527 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 MANEALQ5VSG8 457 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RNF43Q68DV7 783 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 IL31Q6EBC2 164 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 DAAM2Q86T65 1068 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SETD3Q86TU7 594 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 PGBD3Q8N328 593 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 ARFGAP2Q8N6H7 521 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 KCTD6Q8NC69 237 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 OR7D4Q8NG98 312 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CCHCR1Q8TD31 782 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 LMLNQ96KR4 655 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CCDC114Q96M63 670 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 IER2Q9BTL4 223 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CALN1Q9BXU9 219 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 CATSPERBQ9H7T0 1116 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 EBF2Q9HAK2 575 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 NDFIP2Q9NV92 336 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 RAPGEFL1Q9UHV5 662 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SALL4Q9UJQ4 1053 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 TPX2Q9ULW0 747 aaKnown RBP10.18□□□□□ -0.78
LETMD1-234ENST00000552645 TBC1D30Q9Y2I9 924 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 STARD13Q9Y3M8 1113 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 STON1Q9Y6Q2 735 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 SHROOM3Q8TF72 1996 aa10.18□□□□□ -0.78
LETMD1-234ENST00000552645 A0A0A6YYK5 440 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 C5orf60A6NFR6 353 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms