RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 DNA2P51530 1060 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 ATXN3P54252 364 aaPredicted RBP17.1■□□□□ 0.33
BRF1-219ENST00000551787 GALCP54803 685 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 ARF5P84085 180 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 ZNF783Q6ZMS7 281 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 USP30Q70CQ3 517 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 PPM1HQ9ULR3 514 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 NEU3Q9UQ49 428 aa17.1■□□□□ 0.33
BRF1-219ENST00000551787 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.1■□□□□ 0.33
BRF1-219ENST00000551787 RNF103O00237 685 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 ARHGAP33O14559 1287 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 MCF2LO15068 1137 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 BCAT2O15382 392 aaPredicted RBP17.09■□□□□ 0.33
BRF1-219ENST00000551787 ADH1BP00325 375 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 MAPKAPK2P49137 400 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 CNTN1Q12860 1018 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 CA9Q16790 459 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 RETSATQ6NUM9 610 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 NCEH1Q6PIU2 408 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 DSG4Q86SJ6 1040 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 NETO2Q8NC67 525 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 CHST14Q8NCH0 376 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 OR14C36Q8NHC7 312 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 ARHGEF2Q92974 986 aaKnown RBP17.09■□□□□ 0.33
BRF1-219ENST00000551787 ACE2Q9BYF1 805 aaPredicted RBP17.09■□□□□ 0.33
BRF1-219ENST00000551787 ARHGAP20Q9P2F6 1191 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■□□ 18
BRF1-219ENST00000551787 CACNA1AO00555 2505 aa17.09■□□□□ 0.33
BRF1-219ENST00000551787 TNRC6BQ9UPQ9 1833 aaKnown RBP17.08■□□□□ 0.33
BRF1-219ENST00000551787 A0A1B0GTW7 788 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 RAMP2O60895 175 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 CTSLP07711 333 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 MYBL1P10243 752 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 DESP17661 470 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 MIPP30301 263 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 CHRNA3P32297 505 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 EIF4A3P38919 411 aaKnown RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 CSNK1EP49674 416 aaKnown RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 SFSWAPQ12872 951 aaKnown RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 POLD3Q15054 466 aaPredicted RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 ARSIQ5FYB1 569 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 CCDC122Q5T0U0 273 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 RABEPKQ7Z6M1 372 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 ZNF354CQ86Y25 554 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 C1orf216Q8TAB5 229 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 IQCDQ96DY2 449 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 BTBD6Q96KE9 485 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 PEBP4Q96S96 227 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 EPAS1Q99814 870 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 THAP2Q9H0W7 228 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 PCED1AQ9H1Q7 454 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 DHX35Q9H5Z1 703 aaKnown RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 NOL6Q9H6R4 1146 aaKnown RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 SUSD2Q9UGT4 822 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 FCF1Q9Y324 198 aaKnown RBP17.08■□□□□ 0.32
BRF1-219ENST00000551787 NCOR2Q9Y618 2525 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 KNL1Q8NG31 2342 aa17.08■□□□□ 0.32
BRF1-219ENST00000551787 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
BRF1-219ENST00000551787 RNF8O76064 485 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 CD160O95971 181 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 IGHV4-34P06331 123 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 SYPP08247 313 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 DRD3P35462 400 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 SERPINH1P50454 418 aaKnown RBP17.07■□□□□ 0.32
BRF1-219ENST00000551787 ADPRHP54922 357 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 FAM46CQ5VWP2 391 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 KIAA0895LQ68EN5 471 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 SPECC1LQ69YQ0 1117 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 C22orf39Q6P5X5 142 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 ALKBH5Q6P6C2 394 aaKnown RBP17.07■□□□□ 0.32
BRF1-219ENST00000551787 LAYNQ6UX15 382 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 DPY19L3Q6ZPD9 716 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 MINDY1Q8N5J2 469 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 RTL3Q8N8U3 475 aaKnown RBP17.07■□□□□ 0.32
BRF1-219ENST00000551787 GRIN3AQ8TCU5 1115 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 TRIM11Q96F44 468 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 KLC2Q9H0B6 622 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 MAGEH1Q9H213 219 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 MRPL47Q9HD33 250 aaKnown RBP17.07■□□□□ 0.32
BRF1-219ENST00000551787 FZD4Q9ULV1 537 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 AP4E1Q9UPM8 1137 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 SCINQ9Y6U3 715 aa17.07■□□□□ 0.32
BRF1-219ENST00000551787 DOCK4Q8N1I0 1966 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 TBC1D3DA0A087WVF3 549 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 TBC1D3IA0A087WXS9 549 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 TBC1D3EA0A087X179 549 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 TBC1D3KA0A087X1G2 549 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 TBC1D3FA6NER0 549 aaPredicted RBP17.06■□□□□ 0.32
BRF1-219ENST00000551787 LRRC72A6NJI9 287 aa17.06■□□□□ 0.32
BRF1-219ENST00000551787 TBC1D3LB9A6J9 549 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms