RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ODF2Q5BJF6 829 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 SH2D3CQ8N5H7 860 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 UCMAQ8WVF2 138 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 OLFM3Q96PB7 478 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 C2orf49Q9BVC5 232 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-206ENST00000550406 MMP17Q9ULZ9 603 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 HS3ST2Q9Y278 367 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 RAD54BQ9Y620 910 aa13.32□□□□□ -0.28
RAB5C-206ENST00000550406 A0A1W2PQF6 199 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 VAV1P15498 845 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 ZFXP17010 805 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 AVPR2P30518 371 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 CXCR5P32302 372 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 SERPINB6P35237 376 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 ETFBP38117 255 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 GARSP41250 739 aaKnown RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 SATB1Q01826 763 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 IL10RBQ08334 325 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 KLF1Q13351 362 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 CYTH1Q15438 398 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 HSF5Q4G112 596 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 FNDC3BQ53EP0 1204 aaKnown RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 FAM182AQ5T1J6 154 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 KIAA1211LQ6NV74 962 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 NYAP1Q6ZVC0 841 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 B4GALNT4Q76KP1 1039 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 KDM1BQ8NB78 822 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 PTPRN2Q92932 1015 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 VOPP1Q96AW1 172 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 ERLEC1Q96DZ1 483 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 CARD9Q9H257 536 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 IPO11Q9UI26 975 aaKnown RBP13.31□□□□□ -0.28
RAB5C-206ENST00000550406 PLA2G4CQ9UP65 541 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 HEY1Q9Y5J3 304 aa13.31□□□□□ -0.28
RAB5C-206ENST00000550406 CXorf51AA0A1B0GTR3 108 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 PRR33A8MZF0 331 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 NPC1O15118 1278 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 TGM2P21980 687 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 MAGEA9P43362 315 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SERPINH1P50454 418 aaKnown RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SLC20A2Q08357 652 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SIX1Q15475 284 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 DLG2Q15700 870 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 C9orf64Q5T6V5 341 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 MAMSTRQ6ZN01 415 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SYT13Q7L8C5 426 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 ZNF354CQ86Y25 554 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SLC13A5Q86YT5 568 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 CHPFQ8IZ52 775 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 MAML2Q8IZL2 1156 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SPEM1Q8N4L4 309 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 CCDC26Q8TAB7 109 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 TRIM44Q96DX7 344 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 TSGA13Q96PP4 275 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 LGMNQ99538 433 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 PRSS16Q9NQE7 514 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 SLC25A13Q9UJS0 675 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 HPCAL4Q9UM19 191 aa13.3□□□□□ -0.28
RAB5C-206ENST00000550406 R3HDM2Q9Y2K5 976 aaKnown RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 FCF1Q9Y324 198 aaKnown RBP13.3□□□□□ -0.28
RAB5C-206ENST00000550406 ZSCAN5CA6NGD5 496 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 APOC4-APOC2K7ER74 178 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 ATG13O75143 517 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 APOC2P02655 101 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 CCNCP24863 283 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 NR2C2P49116 596 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 PPIDQ08752 370 aaKnown RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 SLC10A7Q0GE19 358 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 CAMK2GQ13555 558 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 NOMO1Q15155 1222 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 CRY1Q16526 586 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 HNRNPA1L2Q32P51 320 aaKnown RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 EOGTQ5NDL2 527 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 PAPD7Q5XG87 772 aaKnown RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 RETSATQ6NUM9 610 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 SERPINA13PQ6UXR4 307 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 TRMT11Q7Z4G4 463 aaKnown RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 LRRC49Q8IUZ0 686 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 ATP11CQ8NB49 1132 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 DTWD2Q8NBA8 298 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 HDAC11Q96DB2 347 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-206ENST00000550406 MS4A14Q96JA4 679 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 FAM129BQ96TA1 746 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 LRFN3Q9BTN0 628 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 ZNF318Q5VUA4 2279 aa13.29□□□□□ -0.28
RAB5C-206ENST00000550406 K7ESF4 209 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 RNF103O00237 685 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms