RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 A0A1W2PR77 199 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 FAM149AA5PLN7 773 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 TCAF2A6NFQ2 919 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 TTC34A8MYJ7 566 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 THAP12O43422 761 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 LATO43561 262 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 HSF2BPO75031 334 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 LETM1O95202 739 aaPredicted RBP7.85□□□□□ -1.15
NEK3-201ENST00000550331 FGFR1OPO95684 399 aaKnown RBP7.85□□□□□ -1.15
NEK3-201ENST00000550331 IL1BP01584 269 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 WNT1P04628 370 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ITGAVP06756 1048 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 C1SP09871 688 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 PDGFRAP16234 1089 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ABCB4P21439 1286 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ITPKBP27987 946 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 NUDT1P36639 197 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 PSMD8P48556 350 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ARRB1P49407 418 aaPredicted RBP7.85□□□□□ -1.15
NEK3-201ENST00000550331 IL9RQ01113 521 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 BECN1Q14457 450 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 CCDC157Q569K6 752 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 SLC45A4Q5BKX6 768 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 RABGAP1LQ5R372 815 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 NAPEPLDQ6IQ20 393 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 TRIM65Q6PJ69 517 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 DSG4Q86SJ6 1040 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 TMPRSS12Q86WS5 348 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 APCDD1Q8J025 514 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 CCAR2Q8N163 923 aaKnown RBP7.85□□□□□ -1.15
NEK3-201ENST00000550331 STK40Q8N2I9 435 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ZNF843Q8N446 348 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 OXR1Q8N573 874 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ATP6V0D2Q8N8Y2 350 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 OR14C36Q8NHC7 312 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 SAP25Q8TEE9 199 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 SLC2A13Q96QE2 648 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 PPP1R9BQ96SB3 815 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 PRMT1Q99873 361 aaKnown RBP7.85□□□□□ -1.15
NEK3-201ENST00000550331 SRRTQ9BXP5 876 aaKnown RBP7.85□□□□□ -1.15
NEK3-201ENST00000550331 FAM204AQ9H8W3 233 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ERVMER34-1Q9H9K5 563 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 EBF2Q9HAK2 575 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 AASDHPPTQ9NRN7 309 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 ASNSD1Q9NWL6 643 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 CYTH4Q9UIA0 394 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 SLCO3A1Q9UIG8 710 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 DMTF1Q9Y222 760 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 HECTD1Q9ULT8 2610 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 TLR4O00206 839 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 ENC1O14682 589 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 ALOX15BO15296 676 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 MAGEC1O60732 1142 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 LDOC1O95751 146 aaPredicted RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 EPHA8P29322 1005 aaPredicted RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 RXRGP48443 463 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 STK19P49842 368 aaPredicted RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 STX17P56962 302 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 NXPH1P58417 271 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 PITX1P78337 314 aaPredicted RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 CDK17Q00537 523 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 OVGP1Q12889 678 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 SHBQ15464 509 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 EFHC1Q5JVL4 640 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 SFMBT2Q5VUG0 894 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 FAM46CQ5VWP2 391 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 CXorf57Q6NSI4 855 aaKnown RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 DHRS13Q6UX07 377 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 PRPF39Q86UA1 669 aaKnown RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 IQCHQ86VS3 1027 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 CIR1Q86X95 450 aaPredicted RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 GATAD2AQ86YP4 633 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 MFSD2AQ8NA29 543 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 FRS2Q8WU20 508 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 OR8D1Q8WZ84 308 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 SERAC1Q96JX3 654 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 CNDP2Q96KP4 475 aaKnown RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 RPL10LQ96L21 214 aaKnown RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 RPRD1AQ96P16 312 aaPredicted RBP7.84□□□□□ -1.15
NEK3-201ENST00000550331 NOX5Q96PH1 765 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 PRORYQ9H606 182 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 ACP6Q9NPH0 428 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 DDIT4Q9NX09 232 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 APEX2Q9UBZ4 518 aa7.84□□□□□ -1.15
NEK3-201ENST00000550331 SPTA1P02549 2419 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 COL5A1P20908 1838 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3DA0A087WVF3 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3IA0A087WXS9 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3EA0A087X179 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3KA0A087X1G2 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3FA6NER0 549 aaPredicted RBP7.83□□□□□ -1.16
NEK3-201ENST00000550331 BECN2A8MW95 431 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 TBC1D3LB9A6J9 549 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 C1QTNF3-AMACRE9PGA6 284 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 J3QKU1 62 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 PLK4O00444 970 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 BIN1O00499 593 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 WNT9AO14904 365 aa7.83□□□□□ -1.16
NEK3-201ENST00000550331 MCF2LO15068 1137 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms