RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 TEX9Q8N6V9 391 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 ENDOVQ8N8Q3 282 aaKnown RBP9.1□□□□□ -0.95
TMEM116-209ENST00000550020 FAM13CQ8NE31 585 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 AGAP11Q8TF27 550 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 CMTM5Q96DZ9 223 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 CCDC126Q96EE4 140 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 TSPAN17Q96FV3 270 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 NUDCD1Q96RS6 583 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 RANBP9Q96S59 729 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 GPR22Q99680 433 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 PAAF1Q9BRP4 392 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 MECRQ9BV79 373 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 ZYG11BQ9C0D3 744 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 NMRAL1Q9HBL8 299 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 ANLNQ9NQW6 1124 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 BATF3Q9NR55 127 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 TLR8Q9NR97 1041 aaKnown RBP9.1□□□□□ -0.95
TMEM116-209ENST00000550020 ARL8BQ9NVJ2 186 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 RBM22Q9NW64 420 aaKnown RBP eCLIP9.1□□□□□ -0.95
TMEM116-209ENST00000550020 TMEM161AQ9NX61 479 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 ABI2Q9NYB9 513 aaPredicted RBP9.1□□□□□ -0.95
TMEM116-209ENST00000550020 STOML1Q9UBI4 398 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 CACNG4Q9UBN1 327 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 GABRQQ9UN88 632 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 DNAJC16Q9Y2G8 782 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.1□□□□□ -0.95
TMEM116-209ENST00000550020 C15orf41Q9Y2V0 281 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 PCDHB12Q9Y5F1 795 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 TRPM7Q96QT4 1865 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 COL4A4P53420 1690 aaPredicted RBP9.1□□□□□ -0.95
TMEM116-209ENST00000550020 SCN10AQ9Y5Y9 1956 aa9.1□□□□□ -0.95
TMEM116-209ENST00000550020 KCNU1A8MYU2 1149 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 SLC22A2O15244 555 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 MAFKO60675 156 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 SIN3BO75182 1162 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 USP12O75317 370 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 ANP32DO95626 131 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 FGF3P11487 239 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CKBP12277 381 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 YY1P25490 414 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CTGFP29279 349 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 PGM1P36871 562 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 OR1G1P47890 313 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 YBEYP58557 167 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 MXRA7P84157 204 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 USP10Q14694 798 aaKnown RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CCDC6Q16204 474 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CTXN3Q4LDR2 81 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CERCAMQ5T4B2 595 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 KIAA0930Q6ICG6 404 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CLEC14AQ86T13 490 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 LRRTM3Q86VH5 581 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 COLGALT2Q8IYK4 626 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 BBS5Q8N3I7 341 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 IPMKQ8NFU5 416 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 SPPL2BQ8TCT7 592 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 HASPINQ8TF76 798 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CELF6Q96J87 481 aaKnown RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 VPS39Q96JC1 886 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 BTN2A3PQ96KV6 586 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 GORASP1Q9BQQ3 440 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 FICDQ9BVA6 458 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 MRPL9Q9BYD2 267 aaKnown RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 RHOBTB2Q9BYZ6 727 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 SLC39A8Q9C0K1 460 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 ILKAPQ9H0C8 392 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 SLC25A51Q9H1U9 297 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TRPC7Q9HCX4 862 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 CHRAC1Q9NRG0 131 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 IARS2Q9NSE4 1012 aaKnown RBP9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TMEM30AQ9NV96 361 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TMLHEQ9NVH6 421 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TMEM216Q9P0N5 145 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 VTI1BQ9UEU0 232 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 EMCNQ9ULC0 261 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 ACOT9Q9Y305 439 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TCAF1Q9Y4C2 921 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 NR2E3Q9Y5X4 410 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 PSAT1Q9Y617 370 aa9.09□□□□□ -0.95
TMEM116-209ENST00000550020 TSC2P49815 1807 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 A0A1W2PQH9 124 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 CAPN14A8MX76 684 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 B2RBV5 119 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 F8W8V4 182 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 I6L893 689 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-209ENST00000550020 DDHD2O94830 711 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 PAPSS2O95340 614 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-209ENST00000550020 C2P06681 752 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 KITP10721 976 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 STMN1P16949 149 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 IBSPP21815 317 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-209ENST00000550020 IGFBP6P24592 240 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-209ENST00000550020 YWHAQP27348 245 aa9.08□□□□□ -0.96
TMEM116-209ENST00000550020 CCND3P30281 292 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-209ENST00000550020 ADSLP30566 484 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms