RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SBK3P0C264 359 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 COL6A2P12110 1019 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 CYP2B6P20813 491 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 DNAJB2P25686 324 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 GNL1P36915 607 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 NR1H2P55055 460 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 PPIDQ08752 370 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ITGA7Q13683 1181 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 LAMC2Q13753 1193 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 KCTD2Q14681 263 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 DCAF6Q58WW2 860 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 INTS6LQ5JSJ4 861 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 C9orf57Q5W0N0 161 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ZNF410Q86VK4 478 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 TMEM102Q8N9M5 508 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 STYXQ8WUJ0 223 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 CNKSR2Q8WXI2 1034 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 FAM149B1Q96BN6 582 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 CNBD2Q96M20 576 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 PGLYRP2Q96PD5 576 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 PKP2Q99959 881 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC2A11Q9BYW1 496 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 NUF2Q9BZD4 464 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 GBA3Q9H227 469 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 CXCL16Q9H2A7 254 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 MRPL40Q9NQ50 206 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 C20orf96Q9NUD7 363 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 MRGBPQ9NV56 204 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 SNTG2Q9NY99 539 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 ZDHHC2Q9UIJ5 367 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 TRHDEQ9UKU6 1024 aa10.05□□□□□ -0.8
SMARCD1-205ENST00000548573 TARM1B6A8C7 271 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 M0QYT0 321 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 TK2O00142 265 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PDGFRBP09619 1106 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 HSPA1AP0DMV8 641 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 HSPA1BP0DMV9 641 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 ENO3P13929 434 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 LMO2P25791 158 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 DPP6P42658 865 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PSMD8P48556 350 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 POLD2P49005 469 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 HCAR3P49019 387 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PKNOX1P55347 436 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 GRM3Q14832 879 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 MYLK3Q32MK0 819 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 ITPRIPL1Q6GPH6 555 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PIGZQ86VD9 579 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 TP53INP2Q8IXH6 220 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 LSMEM2Q8N112 164 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 ACVR1CQ8NER5 493 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 ZFP28Q8NHY6 868 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 IRGQQ8WZA9 623 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 NTAN1Q96AB6 310 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 CATSPER2Q96P56 530 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 VAT1Q99536 393 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 RHOJQ9H4E5 214 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 TIMMDC1Q9NPL8 285 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PDGFCQ9NRA1 345 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 IARS2Q9NSE4 1012 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 GDAP2Q9NXN4 497 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 UTP6Q9NYH9 597 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 THEGQ9P2T0 379 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 EPS15L1Q9UBC2 864 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC39A10Q9ULF5 831 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PCDHGB4Q9UN71 923 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 PCDHGB5Q9Y5G0 923 aa10.04□□□□□ -0.8
SMARCD1-205ENST00000548573 TCAF2A6NFQ2 919 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 PIRO00625 290 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TRIM38O00635 465 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CFLARO15519 480 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 AMHP03971 560 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ERCC2P18074 760 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CD68P34810 354 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 NAGLUP54802 743 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 PITX1P78337 314 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ADIGQ0VDE8 80 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC12A1Q13621 1099 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 KIZQ2M2Z5 673 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TBC1D25Q3MII6 688 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CERCAMQ5T4B2 595 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 GADL1Q6ZQY3 521 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ZC3HC1Q86WB0 502 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 USP13Q92995 863 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 WNT8BQ93098 351 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TOP1MTQ969P6 601 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 HDAC11Q96DB2 347 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ASB9Q96DX5 294 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 MAELQ96JY0 434 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 KLHL32Q96NJ5 620 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC2A13Q96QE2 648 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms