RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NAGPAQ9UK23 515 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 DNAJC12Q9UKB3 198 aa14.45□□□□□ -0.1
PTCH1-217ENST00000548420 AJAP1Q9UKB5 411 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-217ENST00000548420 FOXN3O00409 490 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 RALAP11233 206 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 KRT5P13647 590 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 MLLT3P42568 568 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 MYL5Q02045 173 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 ADIGQ0VDE8 80 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 ARHGAP44Q17R89 818 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 ANKS1BQ7Z6G8 1248 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 C14orf80Q86SX3 495 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 TADA2BQ86TJ2 420 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 FAM71AQ8IYT1 594 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 IFI44Q8TCB0 444 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 CYB5D2Q8WUJ1 264 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 NDRG1Q92597 394 aaKnown RBP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 NAA15Q9BXJ9 866 aaKnown RBP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 NEUROG2Q9H2A3 272 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 ACP6Q9NPH0 428 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 PLCB1Q9NQ66 1216 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 ZNF71Q9NQZ8 489 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 LIMA1Q9UHB6 759 aaKnown RBP14.44□□□□□ -0.1
PTCH1-217ENST00000548420 NUDT5Q9UKK9 219 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 AKAP9Q99996 3911 aa14.44□□□□□ -0.1
PTCH1-217ENST00000548420 HIVEP3Q5T1R4 2406 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 YJEFN3A6XGL0 299 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 E7ENQ6 273 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 M0QYV0 167 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 MED7O43513 233 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 LETM1O95202 739 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-217ENST00000548420 CLCN1P35523 988 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 POLE2P56282 527 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 DAOAP59103 153 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 KLHL40Q2TBA0 621 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 C10orf120Q5SQS8 335 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 FHL5Q5TD97 284 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 CAVIN1Q6NZI2 390 aaKnown RBP14.43□□□□□ -0.1
PTCH1-217ENST00000548420 DENND1BQ6P3S1 775 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 APTXQ7Z2E3 356 aaKnown RBP14.43□□□□□ -0.1
PTCH1-217ENST00000548420 MFSD2AQ8NA29 543 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 IRGQQ8WZA9 623 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 GRAMD1AQ96CP6 724 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 BPIFA3Q9BQP9 254 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 NACA2Q9H009 215 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 PABPC3Q9H361 631 aaKnown RBP14.43□□□□□ -0.1
PTCH1-217ENST00000548420 FBXL12Q9NXK8 326 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 TAB2Q9NYJ8 693 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 ACSL6Q9UKU0 697 aa14.43□□□□□ -0.1
PTCH1-217ENST00000548420 SCN8AQ9UQD0 1980 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 SPG11Q96JI7 2443 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 MDM4O15151 490 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 STC2O76061 302 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 KLKB1P03952 638 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 KRT7P08729 469 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 UCHL3P15374 230 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 GNLYP22749 145 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 GNA15P30679 374 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 RGS7P49802 495 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 CCR5P51681 352 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 MLLT10P55197 1068 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 COG7P83436 770 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 EIF4HQ15056 248 aaKnown RBP14.42□□□□□ -0.1
PTCH1-217ENST00000548420 BSPRYQ5W0U4 402 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 CAPRIN2Q6IMN6 1127 aaKnown RBP14.42□□□□□ -0.1
PTCH1-217ENST00000548420 CRTC1Q6UUV9 634 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 USP30Q70CQ3 517 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 RSRC2Q7L4I2 434 aaKnown RBP14.42□□□□□ -0.1
PTCH1-217ENST00000548420 TMEM110Q86TL2 294 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 ZC3H18Q86VM9 953 aaKnown RBP14.42□□□□□ -0.1
PTCH1-217ENST00000548420 WDTC1Q8N5D0 677 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 VPS16Q9H269 839 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 ABCC13Q9NSE7 274 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 CYTH4Q9UIA0 394 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 PCDHGA7Q9Y5G6 932 aa14.42□□□□□ -0.1
PTCH1-217ENST00000548420 ESPL1Q14674 2120 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 THAP12O43422 761 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 FBXO21O94952 628 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 LCP1P13796 627 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 ACADSBP45954 432 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
PTCH1-217ENST00000548420 PPP2CBP62714 309 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 PPP2CAP67775 309 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 PTK2Q05397 1052 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 GOLGA8FQ08AF8 430 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 GOLGA8DPQ0D2H9 430 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 DRAP1Q14919 205 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-217ENST00000548420 TTC31Q49AM3 519 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-217ENST00000548420 ANO6Q4KMQ2 910 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 MANEAQ5SRI9 462 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 MAMDC2Q7Z304 686 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-217ENST00000548420 ATCAYQ86WG3 371 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 SIX6OS1Q8N1H7 587 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 OR2T34Q8NGX1 318 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 SLC12A9Q9BXP2 914 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 STK33Q9BYT3 514 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 GANQ9H2C0 597 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 OLA1Q9NTK5 396 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms