RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TFAP2DQ7Z6R9 452 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 DSG4Q86SJ6 1040 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 PRPF39Q86UA1 669 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 XYLT1Q86Y38 959 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 KDF1Q8NAX2 398 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 MSANTD4Q8NCY6 345 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 PRR7Q8TB68 274 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ADAMTS14Q8WXS8 1223 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 NT5C3BQ969T7 300 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 SKA1Q96BD8 255 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 SERAC1Q96JX3 654 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 SPAG5Q96R06 1193 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CDC6Q99741 560 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 NLRC4Q9NPP4 1024 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 FAM207AQ9NSI2 230 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 FANCLQ9NW38 375 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ARHGEF38Q9NXL2 777 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 MPP6Q9NZW5 540 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ADAMTS1Q9UHI8 967 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 PPM1HQ9ULR3 514 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 FZD4Q9ULV1 537 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 TBC1D30Q9Y2I9 924 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 PAXBP1Q9Y5B6 917 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 PCDHGB2Q9Y5G2 931 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 OR51B4Q9Y5P0 310 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CNOT1A5YKK6 2376 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 MYO16Q9Y6X6 1858 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 LAMA1P25391 3075 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 KIAA1549LQ6ZVL6 1849 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 A0A0D9SEW6 157 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 DRGXA6NNA5 263 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 E9PAM4 449 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 F8VZ95 297 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 TLR4O00206 839 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CBX4O00257 560 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 MCF2LO15068 1137 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 DFNA5O60443 496 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 LSM8O95777 96 aaKnown RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 WNT1P04628 370 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 RHOCP08134 193 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 SRCP12931 536 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CHRNB2P17787 502 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CDK11BP21127 795 aaKnown RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 RRM1P23921 792 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CDH5P33151 784 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 DRD3P35462 400 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 GRK6P43250 576 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CCT8P50990 548 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CCR5P51681 352 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 PPP2CBP62714 309 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 PPP2CAP67775 309 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 SH3BP2P78314 561 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CNTN1Q12860 1018 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 STAT4Q14765 748 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 KRT31Q15323 416 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CDO1Q16878 200 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 C5orf22Q49AR2 442 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 FKBP15Q5T1M5 1219 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 TRNP1Q6NT89 227 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 SASS6Q6UVJ0 657 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 GLRX5Q86SX6 157 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 FAM131BQ86XD5 332 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 MARCH9Q86YJ5 346 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 GATAD2AQ86YP4 633 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 ZNF683Q8IZ20 524 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 SH2D3CQ8N5H7 860 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 EMC1Q8N766 993 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 OR7D4Q8NG98 312 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 SLC30A5Q8TAD4 765 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 GPT2Q8TD30 523 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 EPS8L1Q8TE68 723 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 SLC20A1Q8WUM9 679 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 RXFP2Q8WXD0 754 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 ZCCHC14Q8WYQ9 949 aaKnown RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 KLK6Q92876 244 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 PGAP3Q96FM1 320 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 C1orf74Q96LT6 269 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 CFAP57Q96MR6 1250 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 C2orf49Q9BVC5 232 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 TNKS2Q9H2K2 1166 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
SCAF11-211ENST00000547950 VPS51Q9UID3 782 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 TMEM59LQ9UK28 342 aa6.87□□□□□ -1.31
SCAF11-211ENST00000547950 GON4LQ3T8J9 2241 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 RALGAPA1Q6GYQ0 2036 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 MYH10P35580 1976 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 A0A1B0GTQ1 180 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 A0A1W2PR77 199 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 FAM221BA6H8Z2 402 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 TMEM8BA6NDV4 472 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SRRM3A6NNA2 597 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 C1QTNF3-AMACRE9PGA6 284 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 KPNA3O00505 521 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 EPHB6O15197 1021 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms