RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 DUSP26Q9BV47 211 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 FAM49AQ9H0Q0 323 aaPredicted RBP4.74□□□□□ -1.65
CBX5-203ENST00000547872 CPVLQ9H3G5 476 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 TBC1D17Q9HA65 648 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 SMURF2Q9HAU4 748 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 SETD4Q9NVD3 440 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 PAG1Q9NWQ8 432 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 MTMR4Q9NYA4 1195 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 EHD3Q9NZN3 535 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 SERTAD3Q9UJW9 196 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 ANGPTL2Q9UKU9 493 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 GINS2Q9Y248 185 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 DOCK5Q9H7D0 1870 aa4.74□□□□□ -1.65
CBX5-203ENST00000547872 MBD3L4A6NDZ8 208 aaPredicted RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 MBD3L3A6NE82 208 aaPredicted RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 TMEM233B4DJY2 109 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 DHX16O60231 1041 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 TLR5O60602 858 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 RASSF9O75901 435 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 FGF18O76093 207 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 URI1O94763 535 aaPredicted RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 NXPH3O95157 252 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 GGPS1O95749 300 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 IFIT2P09913 472 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 NR2F6P10588 404 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 CD52P31358 61 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 RARRES1P49788 294 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 COL10A1Q03692 680 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 CSTF1Q05048 431 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 MTX1Q13505 466 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 GALEQ14376 348 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 TMEM266Q2M3C6 531 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 HSDL1Q3SXM5 330 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 PLA1AQ53H76 456 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 PRR16Q569H4 304 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 C3orf38Q5JPI3 329 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 PLAC9Q5JTB6 97 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 DCAF12L1Q5VU92 463 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 XRRA1Q6P2D8 792 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 GRASPQ7Z6J2 395 aaPredicted RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 SERINC5Q86VE9 423 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 GAS2L3Q86XJ1 694 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 MORC4Q8TE76 937 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 DNAJB3Q8WWF6 145 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 MAML1Q92585 1016 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 APBB2Q92870 758 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 SECISBP2LQ93073 1101 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 NMD3Q96D46 503 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 RTP3Q9BQQ7 232 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 MESP1Q9BRJ9 268 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.73□□□□□ -1.65
CBX5-203ENST00000547872 NUP62CLQ9H1M0 184 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 S1PR5Q9H228 398 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 RANBP17Q9H2T7 1088 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 RIOX1Q9H6W3 641 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 GEMIN8Q9NWZ8 242 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 FOXJ2Q9P0K8 574 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 NDRG4Q9ULP0 352 aaKnown RBP4.73□□□□□ -1.65
CBX5-203ENST00000547872 TRIOO75962 3097 aa4.73□□□□□ -1.65
CBX5-203ENST00000547872 KIAA1217Q5T5P2 1943 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 CACNA1BQ00975 2339 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 DMXL1Q9Y485 3027 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 IGKV6D-41A0A0C4DH26 115 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 WDR27A2RRH5 827 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 ZAR1LA6NP61 321 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 hCG_1984214I3L0E3 225 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 PYCARD-AS1I3L0S3 204 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SLC16A3O15427 465 aaKnown RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 RANBP6O60518 1105 aaKnown RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 LGALS2P05162 132 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 PDHA1P08559 390 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 GOLGA8HP0CJ92 632 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 ZFXP17010 805 aaPredicted RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 RPL17P18621 184 aaKnown RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 KLRC1P26715 233 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 PRKAG1P54619 331 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 RPS16P62249 146 aaKnown RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 FMO1Q01740 532 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 MYO1EQ12965 1108 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 TDGQ13569 410 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 BMPR2Q13873 1038 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 LPIN1Q14693 890 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 CCDC6Q16204 474 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 ZNF280BQ86YH2 543 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 ITPRIPQ8IWB1 547 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 RPAP2Q8IXW5 612 aaPredicted RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 TMEM57Q8N5G2 664 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SIMC1Q8NDZ2 872 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 PPTC7Q8NI37 304 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 TBC1D5Q92609 795 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 P2RX5Q93086 422 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SPSB4Q96A44 273 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 ZNF689Q96CS4 500 aaPredicted RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 PDLIM2Q96JY6 352 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 PPP1R9BQ96SB3 815 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 RMDN3Q96TC7 470 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms