RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TNKS2Q9H2K2 1166 aa20.87■□□□□ 0.93
SSH1-207ENST00000547862 DYRK4Q9NR20 520 aa20.87■□□□□ 0.93
SSH1-207ENST00000547862 AK5Q9Y6K8 562 aa20.87■□□□□ 0.93
SSH1-207ENST00000547862 ARID1BQ8NFD5 2236 aaPredicted RBP20.87■□□□□ 0.93
SSH1-207ENST00000547862 A0A0D9SEW6 157 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 PRAMEF26H0Y7S4 382 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 GOLGA8SH3BPF8 625 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 I6L893 689 aaPredicted RBP20.86■□□□□ 0.93
SSH1-207ENST00000547862 MAGEC1O60732 1142 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 GLDCP23378 1020 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 TAS2R38P59533 333 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 MTA1Q13330 715 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 BRMS1LQ5PSV4 323 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 SFMBT2Q5VUG0 894 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 C22orf39Q6P5X5 142 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 CHST14Q8NCH0 376 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 OR7D4Q8NG98 312 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 C2orf49Q9BVC5 232 aaPredicted RBP20.86■□□□□ 0.93
SSH1-207ENST00000547862 CALN1Q9BXU9 219 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 CAAP1Q9H8G2 361 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 ERVMER34-1Q9H9K5 563 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 PREBQ9HCU5 417 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 SCUBE2Q9NQ36 999 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 ARHGEF38Q9NXL2 777 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 HS3ST2Q9Y278 367 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 TBC1D30Q9Y2I9 924 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 FHOD1Q9Y613 1164 aa20.86■□□□□ 0.93
SSH1-207ENST00000547862 A0A1W2PQU0 124 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 FFAR2O15552 330 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 SMAD6O43541 496 aaKnown RBP20.85■□□□□ 0.93
SSH1-207ENST00000547862 THEGLP0DJG4 465 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 CHRNA3P32297 505 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 RXRGP48443 463 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 VASPP50552 380 aaPredicted RBP20.85■□□□□ 0.93
SSH1-207ENST00000547862 UBE2HP62256 183 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 TARDBPQ13148 414 aaKnown RBP eCLIP20.85■□□□□ 0.93
SSH1-207ENST00000547862 SOWAHCQ53LP3 525 aaPredicted RBP20.85■□□□□ 0.93
SSH1-207ENST00000547862 LRRC31Q6UY01 552 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 TMEM35BQ8NCS4 154 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 ZNF397Q8NF99 534 aaPredicted RBP20.85■□□□□ 0.93
SSH1-207ENST00000547862 KLHDC7BQ96G42 594 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 TRPM6Q9BX84 2022 aa20.85■□□□□ 0.93
SSH1-207ENST00000547862 IGSF10Q6WRI0 2623 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 RNF103O00237 685 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 SRGAP2O75044 1071 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 PCDH8O95206 1070 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 NUDT1P36639 197 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 ABCG1P45844 678 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 CXCR3P49682 368 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 DAB2P98082 770 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 DRAP1Q14919 205 aaPredicted RBP20.84■□□□□ 0.93
SSH1-207ENST00000547862 FBXL19Q6PCT2 694 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 KANSL1Q7Z3B3 1105 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 IQCHQ86VS3 1027 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 FAM114A1Q8IWE2 563 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 FAM71AQ8IYT1 594 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 DCAF4L2Q8NA75 395 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 OR2A12Q8NGT7 310 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 TSC1Q92574 1164 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 SPON2Q9BUD6 331 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 NDST4Q9H3R1 872 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 RRN3Q9NYV6 651 aa20.84■□□□□ 0.93
SSH1-207ENST00000547862 SHROOM3Q8TF72 1996 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 E9PAM4 449 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 C1SP09871 688 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 OR1E1P30953 314 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 FLT3P36888 993 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 RECQLP46063 649 aaPredicted RBP20.83■□□□□ 0.93
SSH1-207ENST00000547862 CLDN2P57739 230 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 C5orf22Q49AR2 442 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 VWA3BQ502W6 1294 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 ARSIQ5FYB1 569 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 SEL1L3Q68CR1 1132 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 PTAR1Q7Z6K3 402 aaPredicted RBP20.83■□□□□ 0.93
SSH1-207ENST00000547862 ERICH1Q86X53 443 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 XYLT1Q86Y38 959 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 ZDHHC17Q8IUH5 632 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 ZNF683Q8IZ20 524 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 MLKLQ8NB16 471 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 C18orf8Q96DM3 657 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 IL36AQ9UHA7 158 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 PAXBP1Q9Y5B6 917 aa20.83■□□□□ 0.93
SSH1-207ENST00000547862 KNTC1P50748 2209 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 EIF4E1BA6NMX2 242 aaKnown RBP20.82■□□□□ 0.92
SSH1-207ENST00000547862 TRIM38O00635 465 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 SIGLEC6O43699 453 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 TLX3O43711 291 aaPredicted RBP20.82■□□□□ 0.92
SSH1-207ENST00000547862 PRNPP04156 253 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 CYP11B1P15538 503 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 CKMT2P17540 419 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 AKT2P31751 481 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 DNA2P51530 1060 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 BPIFB4P59827 614 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 OVGP1Q12889 678 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
SSH1-207ENST00000547862 DPCR1Q3MIW9 517 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 HS1BP3Q53T59 392 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 TMC6Q7Z403 805 aa20.82■□□□□ 0.92
SSH1-207ENST00000547862 SETD3Q86TU7 594 aaPredicted RBP20.82■□□□□ 0.92
SSH1-207ENST00000547862 HORMAD1Q86X24 394 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms