RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IL1BP01584 269 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 GOT1P17174 413 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 ITPKAP23677 461 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 SLC8A1P32418 973 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 ACSL1P33121 698 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 PSMD8P48556 350 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 SERPINH1P50454 418 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 TXNRD3NBQ6F5E7 133 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 C22orf39Q6P5X5 142 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 PRR23CQ6ZRP0 262 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 RFX8Q6ZV50 586 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 USP30Q70CQ3 517 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 UMODL1-AS1Q8N2C9 162 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 GANCQ8TET4 914 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 OR8D1Q8WZ84 308 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 HSPA12BQ96MM6 686 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 OSGEPQ9NPF4 335 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 VPS45Q9NRW7 570 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 TMEM74BQ9NUR3 256 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 FBXL12Q9NXK8 326 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 HPCAL4Q9UM19 191 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 NUMA1Q14980 2115 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 CXorf51AA0A1B0GTR3 108 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 A0A1W2PP55 124 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 MCF2LO15068 1137 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 DAPK3O43293 454 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 KDELR3O43731 214 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 ZNF821O75541 412 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 PROSCO94903 275 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 ADH1BP00325 375 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 RARAP10276 462 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 YBEYP58557 167 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 SLC25A11Q02978 314 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 SF3A2Q15428 464 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 DPYSL2Q16555 572 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 DSG4Q86SJ6 1040 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 CPNE8Q86YQ8 564 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 SYT12Q8IV01 421 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 CADM4Q8NFZ8 388 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 OR2A12Q8NGT7 310 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 SLC35G2Q8TBE7 412 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 HSPH1Q92598 858 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 FOXJ1Q92949 421 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 HMCESQ96FZ2 354 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 BTBD1Q9H0C5 482 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 TNKS2Q9H2K2 1166 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 DONSONQ9NYP3 566 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 CWC15Q9P013 229 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 SERGEFQ9UGK8 458 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 PILRBQ9UKJ0 227 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 SARDHQ9UL12 918 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 PPM1HQ9ULR3 514 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 NCKAP1Q9Y2A7 1128 aa19.12■□□□□ 0.65
PRPF40B-206ENST00000547764 NYNRINQ9P2P1 1898 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 TNRC6BQ9UPQ9 1833 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 ATXN2Q99700 1313 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 RASA4BC9J798 803 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 ALOX15BO15296 676 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 RASA4O43374 803 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 ERCC2P18074 760 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 C5AR1P21730 350 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 SSR1P43307 286 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 HCAR3P49019 387 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 ZNF135P52742 658 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 METAP1P53582 386 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 SFSWAPQ12872 951 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 PARP15Q460N3 678 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 TCEAL6Q6IPX3 200 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 LEKR1Q6ZMV7 388 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 ZNF354CQ86Y25 554 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 AADATQ8N5Z0 425 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 TEKT4Q8WW24 435 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 TCEAL3Q969E4 200 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 PANX2Q96RD6 677 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 OMDQ99983 421 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 CEP44Q9C0F1 390 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 KLC2Q9H0B6 622 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 NEUROG2Q9H2A3 272 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 SGK2Q9HBY8 427 aa19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 FCF1Q9Y324 198 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 FARP1Q9Y4F1 1045 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-206ENST00000547764 METTL12A8MUP2 240 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 PATE3B3GLJ2 98 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 FOXD2O60548 495 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 RNASEH2AO75792 299 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 SEMA4FO95754 770 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 CHRNA3P32297 505 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 NDST2P52849 883 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 GEMIN4P57678 1058 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 LMNB2Q03252 620 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 SERINC3Q13530 473 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 DPYSQ14117 519 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 HADHQ16836 314 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 FAM46CQ5VWP2 391 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 PEAR1Q5VY43 1037 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 POLNQ7Z5Q5 900 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 HDDC3Q8N4P3 179 aa19.1■□□□□ 0.65
PRPF40B-206ENST00000547764 PCDH20Q8N6Y1 951 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms