RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 TRIM38O00635 465 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 KLK10O43240 276 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 PIAS2O75928 621 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 C1QL1O75973 258 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 DXOO77932 396 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 LETM1O95202 739 aaPredicted RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 ZIC2O95409 532 aaPredicted RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 MPOP05164 745 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 VAV1P15498 845 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 CHRNA3P32297 505 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 USP8P40818 1118 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 RPL34P49207 117 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 RPIAP49247 311 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 RPS21P63220 83 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 AUHQ13825 339 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 ARHGAP40Q5TG30 622 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 KIAA1161Q6NSJ0 714 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 KANSL1Q7Z3B3 1105 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 SLC25A45Q8N413 288 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 ARL14Q8N4G2 192 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 FAM181AQ8N9Y4 354 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 FAM131CQ96AQ9 280 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 FEM1CQ96JP0 617 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 APOLD1Q96LR9 279 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 MYOCQ99972 504 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 GOLPH3LQ9H4A5 285 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 RRN3Q9NYV6 651 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 IL36AQ9UHA7 158 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 XPO7Q9UIA9 1087 aaKnown RBP9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 VANGL2Q9ULK5 521 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 COL6A6A6NMZ7 2263 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 ZNF462Q96JM2 2506 aa9.35□□□□□ -0.91
AC055716.3-201ENST00000547533 C10orf142B7Z368 130 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 FPGTO14772 594 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 SCAMP1O15126 338 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 GABBR2O75899 941 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 F9P00740 461 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 IGLV3-25P01717 112 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 AFPP02771 609 aaKnown RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 RHOCP08134 193 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 PRLRP16471 622 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 RABIFP47224 123 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 NEK3P51956 506 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 VAC14Q08AM6 782 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 NME3Q13232 169 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 SGCGQ13326 291 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 PDCLQ13371 301 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 CDCP2Q5VXM1 449 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 OR6B2Q6IFH4 312 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 RETSATQ6NUM9 610 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 FBXL22Q6P050 247 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 DENND1BQ6P3S1 775 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 C11orf57Q6ZUT1 292 aaPredicted RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 SETD3Q86TU7 594 aaPredicted RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 PARGQ86W56 976 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 CIR1Q86X95 450 aaPredicted RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 DEFB106AQ8N104 65 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 TMEM145Q8NBT3 493 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 IFI44Q8TCB0 444 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 BTN2A2Q8WVV5 523 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 ZNF606Q8WXB4 792 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 ARHGEF26Q96DR7 871 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 MYEOVQ96EZ4 313 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 PPP1R13BQ96KQ4 1090 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 IL12RB2Q99665 862 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 PRMT1Q99873 361 aaKnown RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 ZSWIM1Q9BR11 485 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 HDAC8Q9BY41 377 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 SIK2Q9H0K1 926 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 OSBPL2Q9H1P3 480 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 PDCL3Q9H2J4 239 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 WDCPQ9H6R7 721 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 UBE2TQ9NPD8 197 aaPredicted RBP9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 SARDHQ9UL12 918 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 HS3ST2Q9Y278 367 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 HS3ST3A1Q9Y663 406 aa9.34□□□□□ -0.91
AC055716.3-201ENST00000547533 NEMP1O14524 444 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 TCEA3O75764 348 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 SRCP12931 536 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 NOS2P35228 1153 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 KRT9P35527 623 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 MLLT3P42568 568 aaPredicted RBP9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 NUMBP49757 651 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 PMS1P54277 932 aaKnown RBP9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 CENPCQ03188 943 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 PTK2Q05397 1052 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 SLC20A2Q08357 652 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 PTK2BQ14289 1009 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 NR0B2Q15466 257 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 ZNF284Q2VY69 593 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 C3orf38Q5JPI3 329 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 BRMS1LQ5PSV4 323 aa9.33□□□□□ -0.92
AC055716.3-201ENST00000547533 PIP5KL1Q5T9C9 394 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms