RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PRMT1Q99873 361 aaKnown RBP12.4□□□□□ -0.42
HDAC7-226ENST00000547259 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 MAGEB5Q9BZ81 275 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 PCDH18Q9HCL0 1135 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 OR12D3Q9UGF7 316 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 STOML2Q9UJZ1 356 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
HDAC7-226ENST00000547259 FASNP49327 2511 aaKnown RBP12.4□□□□□ -0.42
HDAC7-226ENST00000547259 ACACAQ13085 2346 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 AKAP13Q12802 2813 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ASPMQ8IZT6 3477 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 E9PAM4 449 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 FAM72CH0Y354 149 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 GFRA2O00451 464 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 DAPK3O43293 454 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 NDUFS2O75306 463 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 LRIG2O94898 1065 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 CYBBP04839 570 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ATP1A1P05023 1023 aaKnown RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 GNSP15586 552 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ITPKAP23677 461 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 KDELR1P24390 212 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 L1CAMP32004 1257 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF135P52742 658 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ETF1P62495 437 aaKnown RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 NRG1Q02297 640 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 DPYSL3Q14195 570 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 PDK2Q15119 407 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF423Q2M1K9 1284 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 FAM72AQ5TYM5 149 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 FAM72DQ6L9T8 149 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 RWDD4Q6NW29 188 aaKnown RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 C14orf80Q86SX3 495 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 C12orf40Q86WS4 652 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 FAM72BQ86X60 149 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 CHPFQ8IZ52 775 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 NAT16Q8N8M0 369 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 HJURPQ8NCD3 748 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 EXD1Q8NHP7 514 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 WDR24Q96S15 920 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 NAPGQ99747 312 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 TLR10Q9BXR5 811 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ZDHHC5Q9C0B5 715 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 MBD1Q9UIS9 605 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-226ENST00000547259 MSRB2Q9Y3D2 182 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 DMXL2Q8TDJ6 3036 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 ADAMTS9Q9P2N4 1935 aa12.39□□□□□ -0.43
HDAC7-226ENST00000547259 KNL1Q8NG31 2342 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ARHGAP33O14559 1287 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 KCNK3O14649 394 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CACNG3O60359 315 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 TBL1XO60907 577 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CD48P09326 243 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 HNRNPLP14866 589 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 GOT1P17174 413 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CASQ1P31415 396 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 HTR7P34969 479 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CETN2P41208 172 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 PEX5P50542 639 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ARSEP51690 589 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 SIM1P81133 766 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 MPPE1Q53F39 396 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 WDR45BQ5MNZ6 344 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 MANEALQ5VSG8 457 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 TTC39BQ5VTQ0 682 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 FBXL22Q6P050 247 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 SYT10Q6XYQ8 523 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 RFX8Q6ZV50 586 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ARMCX6Q7L4S7 300 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 TMEM25Q86YD3 366 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 RCOR2Q8IZ40 523 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 DDI1Q8WTU0 396 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ALG3Q92685 438 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 IGSF8Q969P0 613 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 PSMB7Q99436 277 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF670Q9BS34 389 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 GTPBP2Q9BX10 602 aaKnown RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 BBS2Q9BXC9 721 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 ZYG11BQ9C0D3 744 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 TMEM74BQ9NUR3 256 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CWC15Q9P013 229 aaKnown RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 MARK1Q9P0L2 795 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms