RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FAM129BQ96TA1 746 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 DESI2Q9BSY9 194 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 SLC39A8Q9C0K1 460 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 EPC1Q9H2F5 836 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 BCCIPQ9P287 314 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX54-203ENST00000546869 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX54-203ENST00000546869 CHD5Q8TDI0 1954 aa14.77□□□□□ -0.04
DDX54-203ENST00000546869 BUB1O43683 1085 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 KRT86O43790 486 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 RNASEH1O60930 286 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 SIN3BO75182 1162 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 ZNF821O75541 412 aaPredicted RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 P2RY2P41231 377 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 NAP1L1P55209 391 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 SFSWAPQ12872 951 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 PAFAH1B3Q15102 231 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 TAZQ16635 292 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 MAP7D1Q3KQU3 841 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 SPDYCQ5MJ68 293 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 HEATR6Q6AI08 1181 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 KATNAL2Q8IYT4 538 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 SYCE1Q8N0S2 351 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 PCDH20Q8N6Y1 951 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 NPWQ8N729 165 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 ZNF366Q8N895 744 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 PCDH19Q8TAB3 1148 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 RAPGEF5Q92565 580 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 PRCCQ92733 491 aaPredicted RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 SIPA1Q96FS4 1042 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 HMCESQ96FZ2 354 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 ZC3H10Q96K80 434 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 CCDC114Q96M63 670 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 RNF157Q96PX1 679 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 CALN1Q9BXU9 219 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 ETNK2Q9NVF9 386 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 USP36Q9P275 1121 aaKnown RBP14.77□□□□□ -0.05
DDX54-203ENST00000546869 RAPGEFL1Q9UHV5 662 aa14.77□□□□□ -0.05
DDX54-203ENST00000546869 SMAD6O43541 496 aaKnown RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 PRAMEF11O60813 436 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 RPP40O75818 363 aaKnown RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 CCDC175P0C221 793 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 CTNNA1P35221 906 aaKnown RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 PAPOLAP51003 745 aaKnown RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 RPS14P62263 151 aaKnown RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 IL10RBQ08334 325 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 MMRN1Q13201 1228 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 ACCSLQ4AC99 568 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 TMCO4Q5TGY1 634 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 ZNF776Q68DI1 518 aaPredicted RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 LINGO4Q6UY18 593 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 DSG4Q86SJ6 1040 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 RCOR2Q8IZ40 523 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 PQLC3Q8N755 202 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 TMIEQ8NEW7 156 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 OR2A12Q8NGT7 310 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 CELF6Q96J87 481 aaKnown RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 ZNF599Q96NL3 588 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 MTG2Q9H4K7 406 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 PDFQ9HBH1 243 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 PPM1HQ9ULR3 514 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
DDX54-203ENST00000546869 PCDHA3Q9Y5H8 950 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 R4GN57 208 aa14.76□□□□□ -0.05
DDX54-203ENST00000546869 CKAP5Q14008 2032 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 CCDC66A2RUB6 948 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 LRRD1A4D1F6 860 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 GRID2IPA4D2P6 1211 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 K7ERQ8 282 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 ZRANB2O95218 330 aaKnown RBP eCLIP14.75□□□□□ -0.05
DDX54-203ENST00000546869 GSRP00390 522 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 ZFXP17010 805 aaPredicted RBP14.75□□□□□ -0.05
DDX54-203ENST00000546869 CTNNA2P26232 953 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 OXTRP30559 389 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 GJC1P36383 396 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 RFTN1Q14699 578 aaPredicted RBP14.75□□□□□ -0.05
DDX54-203ENST00000546869 CARD16Q5EG05 197 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 NCBP2-AS2Q69YL0 99 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 SLC9A4Q6AI14 798 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 C22orf39Q6P5X5 142 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 USP30Q70CQ3 517 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 SUMF1Q8NBK3 374 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 EXD1Q8NHP7 514 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 OR8D1Q8WZ84 308 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 FATE1Q969F0 183 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 LRIG1Q96JA1 1093 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 SPACA7Q96KW9 195 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 TPSD1Q9BZJ3 242 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 HYOU1Q9Y4L1 999 aa14.75□□□□□ -0.05
DDX54-203ENST00000546869 A0A0U1RQJ8 604 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 MACROD2A1Z1Q3 448 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 ADH1BP00325 375 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 DNTTP04053 509 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 ACADMP11310 421 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 VAV1P15498 845 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 C5AR1P21730 350 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 CDKN2BP42772 138 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 NUMBP49757 651 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 PEX5P50542 639 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 TPMTP51580 245 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms