RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 NFE2L3Q9Y4A8 694 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 SNX14Q9Y5W7 946 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 RP1P56715 2156 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 MED13Q9UHV7 2174 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TRAV19A0A0A6YYK7 116 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TTC26A0AVF1 554 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 NOTOA8MTQ0 251 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 MEI4A8MW99 385 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 KCNJ18B7U540 433 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 LEFTY2O00292 366 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 BCAT2O15382 392 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 FAM189A1O60320 539 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 ZNF217O75362 1048 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 CLSTN1O94985 981 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 OLFM2O95897 454 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 HMGB1P09429 215 aaKnown RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 ODC1P11926 461 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 GNSP15586 552 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 CYP11B2P19099 503 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TNFSF9P41273 254 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 GRIA2P42262 883 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 GRK6P43250 576 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 EFNA5P52803 228 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TMPRSS3P57727 454 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 LILRA4P59901 499 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 IL9RQ01113 521 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 DNAJC3Q13217 504 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 SERINC3Q13530 473 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 KIF19Q2TAC6 998 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TTC31Q49AM3 519 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 PREPLQ4J6C6 727 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 KCNT1Q5JUK3 1230 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 KIAA1614Q5VZ46 1190 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 RHBDF2Q6PJF5 856 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 DSTYKQ6XUX3 929 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 CATSPER3Q86XQ3 398 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 ELOA2Q8IYF1 753 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TERB1Q8NA31 727 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 BTN2A2Q8WVV5 523 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 NAF1Q96HR8 494 aaKnown RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 SGSM3Q96HU1 749 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC140Q96MF4 163 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 ZNF396Q96N95 335 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 PKMYT1Q99640 499 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 GABRG3Q99928 467 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 TRIM9Q9C026 710 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 VIPAS39Q9H9C1 493 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 PDRG1Q9NUG6 133 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 USP36Q9P275 1121 aaKnown RBP6.99□□□□□ -1.29
CCDC60-205ENST00000546345 RSPH14Q9UHP6 348 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 RNF114Q9Y508 228 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 PCDHGA1Q9Y5H4 931 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 RAD54BQ9Y620 910 aa6.99□□□□□ -1.29
CCDC60-205ENST00000546345 LRBAP50851 2863 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 A0A1W2PQ27 194 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 A0A1W2PQ64 194 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 A0A1W2PQC6 194 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 A0A1W2PQU0 124 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 ZNF503-AS2A6NEH8 195 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 TMCO5BA8MYB1 307 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 PAPSS1O43252 624 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 TBX1O43435 398 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 PCDHGA12O60330 932 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 RFPL3O75679 317 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 SMC2O95347 1197 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 CSH1P0DML2 217 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 CSH2P0DML3 217 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 NCAM1P13591 858 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 PAMP19021 973 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 CD6P30203 668 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 HNF1BP35680 557 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 TNFRSF4P43489 277 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 ATP2C1P98194 919 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 NFATC3Q12968 1075 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 MAPK7Q13164 816 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 PPP2R5AQ15172 486 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 WDR45BQ5MNZ6 344 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 SYCP2LQ5T4T6 812 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 DCAF12L1Q5VU92 463 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 HIST2H2BCQ6DN03 193 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 KRBA2Q6ZNG9 492 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC73Q6ZRK6 1079 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 Q6ZUG5 572 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 PIK3AP1Q6ZUJ8 805 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 APBB1IPQ7Z5R6 666 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 LUZP1Q86V48 1076 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 ADGRG2Q8IZP9 1017 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 CEP112Q8N8E3 955 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 C2orf15Q8WU43 125 aaKnown RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 ZNF669Q96BR6 464 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 TOE1Q96GM8 510 aaKnown RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 LIN37Q96GY3 246 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 JMJD8Q96S16 334 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 LGMNQ99538 433 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 MRPL4Q9BYD3 311 aaKnown RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 WSB2Q9NYS7 404 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 FTSJ1Q9UET6 329 aa6.98□□□□□ -1.29
CCDC60-205ENST00000546345 EIF2B4Q9UI10 523 aaKnown RBP6.98□□□□□ -1.29
CCDC60-205ENST00000546345 RCOR1Q9UKL0 485 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms