RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RAB6CQ9H0N0 254 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 EBF3Q9H4W6 596 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 CD320Q9NPF0 282 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 HPS4Q9NQG7 708 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TMEM51Q9NW97 253 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 THG1LQ9NWX6 298 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 DUS2Q9NX74 493 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TBC1D14Q9P2M4 693 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 FAM8A1Q9UBU6 413 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 LCMT1Q9UIC8 334 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 MUTYHQ9UIF7 546 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 AGO1Q9UL18 857 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TFR2Q9UP52 801 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 MUC22E2RYF6 1773 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 WDFY4Q6ZS81 3184 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 A0A0A6YYK5 440 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 BTNL10A8MVZ5 291 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 I6L893 689 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 MYO1FO00160 1098 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 NARSO43776 548 aaKnown RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ACSL4O60488 711 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 LRCH4O75427 683 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PAGE1O75459 146 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ENDOD1O94919 500 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CCDC175P0C221 793 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 FOSL1P15407 271 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 MAN1A1P33908 653 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CXCR3P49682 368 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 HADHBP55084 474 aaKnown RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PFKPQ01813 784 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 TNK2Q07912 1038 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 SCAPQ12770 1279 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 MTA1Q13330 715 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PIGHQ14442 188 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 FAM133BQ5BKY9 247 aaKnown RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PIK3R6Q5UE93 754 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 DAB2IPQ5VWQ8 1189 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 NADSYN1Q6IA69 706 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 C11orf63Q6NUN7 778 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 HTR3DQ70Z44 454 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CHSY1Q86X52 802 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 SHISA5Q8N114 240 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CPXM2Q8N436 756 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 SLC44A3Q8N4M1 653 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CCDC185Q8N715 623 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ATP6V0D2Q8N8Y2 350 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 SLC35G2Q8TBE7 412 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CSGALNACT1Q8TDX6 532 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 CENPIQ92674 756 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 NTAN1Q96AB6 310 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PRICKLE1Q96MT3 831 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 FANCD2OSQ96PS1 177 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PEBP4Q96S96 227 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 PPP1R9BQ96SB3 815 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 TSGA10Q9BZW7 698 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 TKTL2Q9H0I9 626 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 SLC2A4RGQ9NR83 387 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 C1GALT1Q9NS00 363 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ARHGEF38Q9NXL2 777 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 IP6K2Q9UHH9 426 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 XPO7Q9UIA9 1087 aaKnown RBP6.54□□□□□ -1.36
PRKDC-211ENST00000546304 STOML2Q9UJZ1 356 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ZNF510Q9Y2H8 683 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ATG2BQ96BY7 2078 aa6.54□□□□□ -1.36
PRKDC-211ENST00000546304 ZNF318Q5VUA4 2279 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 A0A0U1RQJ8 604 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 MACROD2A1Z1Q3 448 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 TYW5A2RUC4 315 aaKnown RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ANKRD33BA6NCL7 494 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 OTOL1A6NHN0 477 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 TMEM110-MUSTN1A8MSY1 372 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 KCNU1A8MYU2 1149 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 NEDD8-MDP1E9PL57 170 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 F5H5T6 163 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 GFRA2O00451 464 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 PJA2O43164 708 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 HOXC11O43248 304 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 PRPSAP2O60256 369 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 BUB1BO60566 1050 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 RNF8O76064 485 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 PROSCO94903 275 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 TCF4P15884 667 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 MIPP30301 263 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SLC6A4P31645 630 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 PCK1P35558 622 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 CHKAP35790 457 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 GJC1P36383 396 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 NOP2P46087 812 aaKnown RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 AIF1P55008 147 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SLC25A11Q02978 314 aaKnown RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 KIF5AQ12840 1032 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 RUNX3Q13761 415 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 MESDQ14696 234 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ACAP1Q15027 740 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 DHCR24Q15392 516 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SMTNL2Q2TAL5 461 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ITPRIPL2Q3MIP1 535 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms