RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SLC25A3Q00325 362 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ROR2Q01974 943 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 MAP2K5Q13163 448 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SEMA5AQ13591 1074 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 MSS51Q4VC12 460 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ZNF470Q6ECI4 717 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 MARK2Q7KZI7 788 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 TMC7Q7Z402 723 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 RPRD1AQ96P16 312 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 EPB41L4BQ9H329 900 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 FBXO44Q9H4M3 255 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 POLE3Q9NRF9 147 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 FARP1Q9Y4F1 1045 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 C2orf81A6NN90 581 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 UBDO15205 165 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 DCXO43602 365 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SOAT2O75908 522 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SUPT7LO94864 414 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PROCP04070 461 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 RPL9P32969 192 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 KPNA1P52294 538 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 GSCP56915 257 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 MTA1Q13330 715 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CTXN3Q4LDR2 81 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 WLSQ5T9L3 541 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SLC9A4Q6AI14 798 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 TTC30AQ86WT1 665 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PYROXD2Q8N2H3 581 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ELMOD1Q8N336 334 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 WDTC1Q8N5D0 677 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CLEC4CQ8WTT0 213 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 NDRG1Q92597 394 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 PEBP4Q96S96 227 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GAD1Q99259 594 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 HNRNPABQ99729 332 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 COLEC11Q9BWP8 271 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SLC4A5Q9BY07 1137 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CCDC90BQ9GZT6 254 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 TLR8Q9NR97 1041 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 RIC8BQ9NVN3 520 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 FAM8A1Q9UBU6 413 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GIT1Q9Y2X7 761 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ARFGEF1Q9Y6D6 1849 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 TTLL13PA6NNM8 815 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CAPN15O75808 1086 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 STAU1O95793 577 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 MYL4P12829 197 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ERCC2P18074 760 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GRIA4P48058 902 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 INCA1Q0VD86 236 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SLC39A12Q504Y0 691 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ZRANB3Q5FWF4 1079 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SPDYAQ5MJ70 313 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 UBAP2Q5T6F2 1119 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 LIPMQ5VYY2 423 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 NCBP2-AS2Q69YL0 99 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 UGT3A1Q6NUS8 523 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 LAYNQ6UX15 382 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 RNF180Q86T96 592 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SNX32Q86XE0 403 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 NETO2Q8NC67 525 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 RBBP8Q99708 897 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 LPIN3Q9BQK8 851 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PDGFDQ9GZP0 370 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 IL1RL2Q9HB29 575 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GOLGA2P5Q9HBQ8 144 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PNPOQ9NVS9 261 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 TEKT2Q9UIF3 430 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SIX4Q9UIU6 781 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 MYH11P35749 1972 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PHGDHO43175 533 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 MAGEC1O60732 1142 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 STBD1O95210 358 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PIGNO95427 931 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CRTAMO95727 393 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 TFE3P19532 575 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 XPAP23025 273 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 EDNRBP24530 442 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 HMOX2P30519 316 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ABCG1P45844 678 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 SLC11A2P49281 568 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 RAB10P61026 200 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 VEPH1Q14D04 833 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 MARC1Q5VT66 337 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZFP1Q6P2D0 407 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 GPR141Q7Z602 305 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF555Q8NEP9 628 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 NLGN2Q8NFZ4 835 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 LPPQ93052 612 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ULK4Q96C45 1275 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF333Q96JL9 665 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZFRQ96KR1 1074 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 CDK5RAP1Q96SZ6 601 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 TRPC7Q9HCX4 862 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PCDHB5Q9Y5E4 795 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 MANSC4A6NHS7 340 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms