RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 IRF2BP1Q8IU81 584 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 AHSPQ9NZD4 102 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 RPS6KB2Q9UBS0 482 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 IFNA14P01570 189 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 HOXC6P09630 235 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 ALADP13716 330 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 IGFBP4P22692 258 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 FLT3LGP49771 235 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 CDK7P50613 346 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 ZNF438Q7Z4V0 828 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 MFSD14AQ96MC6 490 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 PCDHB18PQ96TA0 734 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 GRM5P41594 1212 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 FAM98BQ52LJ0 330 aaKnown RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 PACSIN3Q9UKS6 424 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 DYRK3O43781 588 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 ELNP15502 786 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 TGM3Q08188 693 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 XRCC4Q13426 336 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 DEFB115Q30KQ5 88 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 GPR20Q99678 358 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 LRRC19Q9H756 370 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PCDHA11Q9Y5I1 949 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PSMD12O00232 456 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PTPN3P26045 913 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 ZNF135P52742 658 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 BBS12Q6ZW61 710 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 NDRG1Q92597 394 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 ZNF446Q9NWS9 450 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 REXO2Q9Y3B8 237 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 ZMPSTE24O75844 475 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 RAD23AP54725 363 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 MAD2L1Q13257 205 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 CTBP1Q13363 440 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 UROC1Q96N76 676 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 ERBB2P04626 1255 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 CCDC159P0C7I6 412 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PPP2R1BP30154 601 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 GPR15P49685 360 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 TTC7BQ86TV6 843 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 GFM2Q969S9 779 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 NACC2Q96BF6 587 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 FAM126AQ9BYI3 521 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 PAPSS1O43252 624 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 CYP2C18P33260 490 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 MATKP42679 507 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 TARBP2Q15633 366 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 SNX30Q5VWJ9 437 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 DSG4Q86SJ6 1040 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 FAM228AQ86W67 206 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 GDPD5Q8WTR4 605 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 SEMA6AQ9H2E6 1030 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 A0A087X1B8 175 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 ADCY6O43306 1168 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 MSCO60682 206 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 CLPTM1O96005 669 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 ITGAVP06756 1048 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 LTA4HP09960 611 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 ME2P23368 584 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PRKAA2P54646 552 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 DEFA1P59665 94 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 DEFA3P59666 94 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 SLC9A5Q14940 896 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 SCIMPQ6UWF3 145 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 STK32CQ86UX6 486 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PTGR2Q8N8N7 351 aaPredicted RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 NMD3Q96D46 503 aaKnown RBP12.97□□□□□ -0.33
CHD4-211ENST00000544484 NDOR1Q9UHB4 597 aa12.97□□□□□ -0.33
CHD4-211ENST00000544484 PEX11AO75192 247 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 CTPS1P17812 591 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 GALNT3Q14435 633 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 SYT12Q8IV01 421 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 CSGALNACT1Q8TDX6 532 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 KCTD4Q8WVF5 259 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.33
CHD4-211ENST00000544484 HIC2Q96JB3 615 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 KLHL5Q96PQ7 755 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 ZNF670Q9BS34 389 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 NDUFB5O43674 189 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 OR4Q2P0C623 313 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 CTNNB1P35222 781 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 ACSM2AQ08AH3 577 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 PTPN20Q4JDL3 420 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 HYIQ5T013 277 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 ACSM2BQ68CK6 577 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 SH3GL3Q99963 347 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 ATRNO75882 1429 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms