RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KDELR3O43731 214 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 TTC4O95801 387 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 CYBBP04839 570 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 IFNAR2P48551 515 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 SARNPP82979 210 aaKnown RBP31.02■■■□□ 2.56
CCM2-219ENST00000544363 TNK2Q07912 1038 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 SLC10A7Q0GE19 358 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 PRPSAP1Q14558 356 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 LRIT3Q3SXY7 679 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 FSCBQ5H9T9 825 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 OTOP3Q7RTS5 596 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 CAND1Q86VP6 1230 aaKnown RBP31.02■■■□□ 2.56
CCM2-219ENST00000544363 NPAS3Q8IXF0 933 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 BHMTQ93088 406 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 MUC3BQ9H195 1237 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 ATP13A1Q9HD20 1204 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 NINJ2Q9NZG7 142 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 PDE4DIPQ5VU43 2346 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 HOXB8P17481 243 aaPredicted RBP31.02■■■□□ 2.56
CCM2-219ENST00000544363 OXCT1P55809 520 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 CDH18Q13634 790 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 KYNUQ16719 465 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 DENND2CQ68D51 928 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 RNF43Q68DV7 783 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 MFN1Q8IWA4 741 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 ZBED8Q8IZ13 594 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 C9orf72Q96LT7 481 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 FCRL5Q96RD9 977 aa31.02■■■□□ 2.56
CCM2-219ENST00000544363 NUP210Q8TEM1 1887 aaPredicted RBP31.01■■■□□ 2.55
CCM2-219ENST00000544363 ERI2A8K979 691 aaKnown RBP31.01■■■□□ 2.55
CCM2-219ENST00000544363 SLC29A2Q14542 456 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 LBRQ14739 615 aaKnown RBP31.01■■■□□ 2.55
CCM2-219ENST00000544363 FASTKD3Q14CZ7 662 aaKnown RBP31.01■■■□□ 2.55
CCM2-219ENST00000544363 BBS9Q3SYG4 887 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 UBAP2Q5T6F2 1119 aaKnown RBP31.01■■■□□ 2.55
CCM2-219ENST00000544363 TMCO4Q5TGY1 634 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 LRIG3Q6UXM1 1119 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 ZNF534Q76KX8 674 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 KLHDC8BQ8IXV7 354 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 XAB2Q9HCS7 855 aaKnown RBP31.01■■■□□ 2.55
CCM2-219ENST00000544363 TTLL3Q9Y4R7 772 aa31.01■■■□□ 2.55
CCM2-219ENST00000544363 AGPSO00116 658 aa31■■■□□ 2.55
CCM2-219ENST00000544363 BANF1O75531 89 aa31■■■□□ 2.55
CCM2-219ENST00000544363 AP2A1O95782 977 aa31■■■□□ 2.55
CCM2-219ENST00000544363 MMP13P45452 471 aa31■■■□□ 2.55
CCM2-219ENST00000544363 FAM193AP78312 1265 aa31■■■□□ 2.55
CCM2-219ENST00000544363 FYB2Q5VWT5 728 aa31■■■□□ 2.55
CCM2-219ENST00000544363 KCTD11Q693B1 232 aa31■■■□□ 2.55
CCM2-219ENST00000544363 CCDC117Q8IWD4 279 aaPredicted RBP31■■■□□ 2.55
CCM2-219ENST00000544363 WFDC5Q8TCV5 224 aa31■■■□□ 2.55
CCM2-219ENST00000544363 FGF13Q92913 245 aa31■■■□□ 2.55
CCM2-219ENST00000544363 OTUB2Q96DC9 234 aa31■■■□□ 2.55
CCM2-219ENST00000544363 TTC25Q96NG3 672 aa31■■■□□ 2.55
CCM2-219ENST00000544363 PPP1R2P1Q96PQ5 205 aa31■■■□□ 2.55
CCM2-219ENST00000544363 RUFY1Q96T51 708 aa31■■■□□ 2.55
CCM2-219ENST00000544363 MLPHQ9BV36 600 aaPredicted RBP31■■■□□ 2.55
CCM2-219ENST00000544363 NT5MQ9NPB1 228 aa31■■■□□ 2.55
CCM2-219ENST00000544363 PLK2Q9NYY3 685 aa31■■■□□ 2.55
CCM2-219ENST00000544363 CDH22Q9UJ99 828 aa31■■■□□ 2.55
CCM2-219ENST00000544363 NFS1Q9Y697 457 aa31■■■□□ 2.55
CCM2-219ENST00000544363 GOLGA6CA6NDK9 693 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 AVILO75366 819 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 SUN1O94901 812 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 NUDT17P0C025 328 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 GOLGA6DP0CG33 693 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 MAGEA3P43357 314 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 NUMBP49757 651 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 HP1BP3Q5SSJ5 553 aaPredicted RBP30.99■■■□□ 2.55
CCM2-219ENST00000544363 KIAA1958Q8N8K9 716 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 ZBTB9Q96C00 473 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 FEM1AQ9BSK4 669 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 GOLGA6AQ9NYA3 693 aa30.99■■■□□ 2.55
CCM2-219ENST00000544363 PSMD3O43242 534 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 ACSL3O95573 720 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 MLNP12872 115 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 MZF1P28698 734 aaPredicted RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 GRIA1P42261 906 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 MTM1Q13496 603 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 LEKR1Q6ZMV7 388 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 GET4Q7L5D6 327 aaPredicted RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 OXNAD1Q96HP4 312 aaPredicted RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 LINC00597Q9H2U6 94 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 FAM53CQ9NYF3 392 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 GDE1Q9NZC3 331 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 AAR2Q9Y312 384 aaKnown RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 OR51B4Q9Y5P0 310 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 A0A1W2PPC1 479 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 SLC9A3R1O14745 358 aaPredicted RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 ANXA9O76027 345 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 GLDCP23378 1020 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 DNAJC21Q5F1R6 531 aaKnown RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 FAM78AQ5JUQ0 283 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 LRRC8BQ6P9F7 803 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 TMEM25Q86YD3 366 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 ANKMY2Q8IV38 441 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 FIBINQ8TAL6 211 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 PYROXD1Q8WU10 500 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 ASB16Q96NS5 453 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 SLC25A51Q9H1U9 297 aa30.98■■■□□ 2.55
CCM2-219ENST00000544363 CLEC1BQ9P126 229 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms