RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 WDFY2Q96P53 400 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 LRRC37BQ96QE4 947 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 GCNAQ96QF7 691 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 HGH1Q9BTY7 390 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 AMBRA1Q9C0C7 1298 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 SAP30LQ9HAJ7 183 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 SLC22A11Q9NSA0 550 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 SMPD4Q9NXE4 827 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 PEMTQ9UBM1 199 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 HSPB7Q9UBY9 170 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ANAPC5Q9UJX4 755 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CCL27Q9Y4X3 112 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CAPN7Q9Y6W3 813 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 DUSP10Q9Y6W6 482 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF335Q9H4Z2 1342 aaPredicted RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CARMIL1Q5VZK9 1371 aa4.15□□□□□ -1.74
SFSWAP-211ENST00000542813 A0A1W2PQF6 199 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 A1L4Q6 167 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GRXCR1A8MXD5 290 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 BTBD18B2RXH4 712 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 EIF3CLB5ME19 914 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 KCNJ18B7U540 433 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 DIRC3C9JPN6 131 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 CTDSP2O14595 271 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF185O15231 689 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 HBP1O60381 514 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 CCNT1O60563 726 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 PAGE4O60829 102 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 TACC1O75410 805 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SLU7O95391 586 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ATP5BP06576 529 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GALTP07902 379 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ELANEP08246 267 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MYBL1P10243 752 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF8P17098 575 aaPredicted RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 TNFRSF1AP19438 455 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MATN1P21941 496 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 PRPH2P23942 346 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ATP6V1E1P36543 226 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 LIPAP38571 399 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC15A1P46059 708 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MTNR1AP48039 350 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 CEBPZQ03701 1054 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 DEUP1Q05D60 604 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 WASHC5Q12768 1159 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 DNASE1L3Q13609 305 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 FRG1Q14331 258 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 PCLAFQ15004 111 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ADIPOQQ15848 244 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GPR162Q16538 588 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC18A3Q16572 532 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GSTA3Q16772 222 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 AP5B1Q2VPB7 878 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ODF2Q5BJF6 829 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 NAPEPLDQ6IQ20 393 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MTFR2Q6P444 385 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GJB7Q6PEY0 223 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 TMEM88Q6PEY1 159 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MAMDC4Q6UXC1 1216 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC46A3Q7Z3Q1 461 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 FAM124AQ86V42 546 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 TMPRSS6Q8IU80 811 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 TICAM1Q8IUC6 712 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 BRSK2Q8IWQ3 736 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 CCDC170Q8IYT3 715 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 VPS52Q8N1B4 723 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 NUP93Q8N1F7 819 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ZBTB8BQ8NAP8 495 aaPredicted RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 OR6J1Q8NGC5 347 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GSDMBQ8TAX9 411 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 NEK9Q8TD19 979 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SNX21Q969T3 373 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 R3HDM4Q96D70 268 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 RMDN1Q96DB5 314 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SAT2Q96F10 170 aaPredicted RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 PGAM5Q96HS1 289 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 C1orf74Q96LT6 269 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 OR14A2Q96R54 314 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 FNBP1Q96RU3 617 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 LMF1Q96S06 567 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MAP7D2Q96T17 732 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 MPHOSPH9Q99550 1183 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 ELOVL1Q9BW60 279 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 STRA6Q9BX79 667 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 HDHD5Q9BXW7 423 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 TRIM31Q9BZY9 425 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC32A1Q9H598 525 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 POLR1BQ9H9Y6 1135 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 FBRSL1Q9HCM7 1045 aaKnown RBP4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 LTB4R2Q9NPC1 389 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 RRP7BPQ9NSQ0 103 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC25A13Q9UJS0 675 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 VPS4AQ9UN37 437 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 SESN1Q9Y6P5 492 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 GOLGA3Q08378 1498 aa4.15□□□□□ -1.75
SFSWAP-211ENST00000542813 C9orf84Q5VXU9 1444 aa4.14□□□□□ -1.75
SFSWAP-211ENST00000542813 hCG_1809904A0A1W2PP81 198 aa4.14□□□□□ -1.75
SFSWAP-211ENST00000542813 A0A1W2PPE2 198 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms