RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 WASHC2DQ5SRD0 308 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 IL23RQ5VWK5 629 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 NXNQ6DKJ4 435 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 OLFM4Q6UX06 510 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TOGARAM2Q6ZUX3 1019 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 PDSS2Q86YH6 399 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 IQCKQ8N0W5 287 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 SLC35F6Q8N357 371 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 POC1BQ8TC44 478 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 KCNG4Q8TDN1 519 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 DNAJC9Q8WXX5 260 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 USP6NLQ92738 828 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 FAM136AQ96C01 138 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TIMP4Q99727 224 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 SYT15Q9BQS2 421 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 SLC13A1Q9BZW2 595 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 FTOQ9C0B1 505 aaKnown RBP eCLIP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 DRC3Q9H069 523 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 MRPL44Q9H9J2 332 aaKnown RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 PARVGQ9HBI0 331 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 ARHGEF3Q9NR81 526 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 FAM114A2Q9NRY5 505 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 SIDT1Q9NXL6 827 aaKnown RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 CFAP97Q9P2B7 532 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 PCSK1NQ9UHG2 260 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 SLC12A6Q9UHW9 1150 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TUBE1Q9UJT0 475 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TBC1D30Q9Y2I9 924 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 FAM32AQ9Y421 112 aaKnown RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 COMMD10Q9Y6G5 202 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 C5P01031 1676 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 A0A0B4J269 797 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 VPS4BO75351 444 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TAF5LO75529 589 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TJP3O95049 919 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 SLC3A2P08195 630 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 IFIT2P09913 472 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 PABPC4LP0CB38 370 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 EIF2S2P20042 333 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 LPOP22079 712 aaPredicted RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 ATICP31939 592 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 MATR3P43243 847 aaKnown RBP eCLIP6.1□□□□□ -1.431e-6■■■■□ 25.1
XRCC4-206ENST00000542685 MSH2P43246 934 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 PROK1P58294 105 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 NXPH1P58417 271 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 POU5F1Q01860 360 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 PLOD1Q02809 727 aaPredicted RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TUBB3Q13509 450 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 DCTN2Q13561 401 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 CNPY1Q3B7I2 92 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 DEPDC1Q5TB30 811 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF788Q6ZQV5 615 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TRPM8Q7Z2W7 1104 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 CPLX4Q7Z7G2 160 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 AMIGO2Q86SJ2 522 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 MAP7D3Q8IWC1 876 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 IFT20Q8IY31 132 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 CHMP6Q96FZ7 201 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF274Q96GC6 653 aaPredicted RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 EPSTI1Q96J88 318 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 C8orf76Q96K31 380 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 NEK1Q96PY6 1258 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TMEM237Q96Q45 408 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 GSDMAQ96QA5 445 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 RPS6KC1Q96S38 1066 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 SEC62Q99442 399 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 SDF4Q9BRK5 362 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TPSD1Q9BZJ3 242 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 UNKQ9C0B0 810 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 RSPH9Q9H1X1 276 aaPredicted RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 SMOC2Q9H3U7 446 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 TMBIM4Q9HC24 238 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 METTL14Q9HCE5 456 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 PLCB1Q9NQ66 1216 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 MRPS18AQ9NVS2 196 aaKnown RBP6.1□□□□□ -1.43
XRCC4-206ENST00000542685 CYP39A1Q9NYL5 469 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 DLGAP2Q9P1A6 1054 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 GTF3C4Q9UKN8 822 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 NUP188Q5SRE5 1749 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 NWD2Q9ULI1 1742 aa6.1□□□□□ -1.43
XRCC4-206ENST00000542685 MYH8P13535 1937 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 MYO5AQ9Y4I1 1855 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 TJP1Q07157 1748 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 GCOM1H8Y6P7 765 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 MARCH6O60337 910 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ECE2O60344 883 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 RHOP08100 348 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 MYZAPP0CAP1 466 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 PIM1P11309 404 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 CCNB1P14635 433 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 WT1P19544 449 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 CHRM3P20309 590 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 DRD4P21917 467 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 CA8P35219 290 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 VHLP40337 213 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms