RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SDR42E2A6NKP2 422 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 PEX11BO96011 259 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 MT-CYBP00156 380 aaPredicted RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 CPP00450 1065 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 AGTP01019 485 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 HLA-DQB2P05538 268 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 MLNP12872 115 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 EPCAMP16422 314 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 TSHRP16473 764 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 GCAP28676 217 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CDC25CP30307 473 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 PBX2P40425 430 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CCR2P41597 374 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 RENBPP51606 427 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CDH4P55283 916 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 HNRNPDQ14103 355 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 PARP15Q460N3 678 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 MARC1Q5VT66 337 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 KCTD11Q693B1 232 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 LEKR1Q6ZMV7 388 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 OR52K1Q8NGK4 314 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 MAML1Q92585 1016 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 OXNAD1Q96HP4 312 aaPredicted RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 XPO6Q96QU8 1125 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 EBNA1BP2Q99848 306 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 SLC46A2Q9BY10 475 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 GLOD4Q9HC38 313 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 TCRBV9S1A1TA0A576 114 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 FOXO6A8MYZ6 492 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 H3BNC9 293 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CACNG3O60359 315 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 GREM1O60565 184 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 CDH16O75309 829 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 MGAT1P26572 445 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 GEMIN4P57678 1058 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 ITKQ08881 620 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 SLC10A7Q0GE19 358 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 GPM6BQ13491 265 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 SERINC3Q13530 473 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 EFTUD2Q15029 972 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCG3-202ENST00000542355 TERF2Q15554 542 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 ZNF697Q5TEC3 545 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 DNAAF3Q8N9W5 541 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 OR52K2Q8NGK3 314 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 NSMCE1Q8WV22 266 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 PMM1Q92871 262 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 FCRL5Q96RD9 977 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 DDX50Q9BQ39 737 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 APOL2Q9BQE5 337 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 STMN4Q9H169 189 aaPredicted RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 YBX2Q9Y2T7 364 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 AAR2Q9Y312 384 aaKnown RBP11.23□□□□□ -0.61
SCG3-202ENST00000542355 PLXNA4Q9HCM2 1894 aa11.23□□□□□ -0.61
SCG3-202ENST00000542355 LAMA3Q16787 3333 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.22□□□□□ -0.61
SCG3-202ENST00000542355 TRAV19A0A0A6YYK7 116 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 ERI2A8K979 691 aaKnown RBP11.22□□□□□ -0.61
SCG3-202ENST00000542355 CLDN11O75508 207 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 SUN1O94901 812 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 PTPN2P17706 415 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 ETFBP38117 255 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 MMP13P45452 471 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 IL10RBQ08334 325 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 ZNF177Q13360 481 aaPredicted RBP11.22□□□□□ -0.61
SCG3-202ENST00000542355 TNFAIP8L3Q5GJ75 292 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 UNC5AQ6ZN44 842 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 OR7D4Q8NG98 312 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 ARHGEF2Q92974 986 aaKnown RBP11.22□□□□□ -0.61
SCG3-202ENST00000542355 TCEAL4Q96EI5 215 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 SMG9Q9H0W8 520 aaKnown RBP11.22□□□□□ -0.61
SCG3-202ENST00000542355 ACSS3Q9H6R3 686 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 PLAC1Q9HBJ0 212 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 NT5MQ9NPB1 228 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 DNMT3BQ9UBC3 853 aaKnown RBP11.22□□□□□ -0.61
SCG3-202ENST00000542355 STOML2Q9UJZ1 356 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 NUP205Q92621 2012 aa11.22□□□□□ -0.61
SCG3-202ENST00000542355 SPAG6O75602 509 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 MAXP61244 160 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 ERVK-21P61565 698 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 PPP2R2AP63151 447 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 SLC7A9P82251 487 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 GNA12Q03113 381 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 GABPB1Q06547 395 aaPredicted RBP11.21□□□□□ -0.61
SCG3-202ENST00000542355 KLHL38Q2WGJ6 581 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 KBTBD12Q3ZCT8 623 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 TTC19Q6DKK2 380 aaPredicted RBP11.21□□□□□ -0.61
SCG3-202ENST00000542355 KDM7AQ6ZMT4 941 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
SCG3-202ENST00000542355 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
SCG3-202ENST00000542355 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 BHMTQ93088 406 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms