RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 FBXW11Q9UKB1 542 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 SOX13Q9UN79 622 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 TANC1Q9C0D5 1861 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 CIB2O75838 187 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 ZCCHC18P0CG32 403 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 RPL10AP62906 217 aaKnown RBP17.51■□□□□ 0.39
SPIDR-227ENST00000541342 AP2B1P63010 937 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 CRADDP78560 199 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 DPYSQ14117 519 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 POU5F2Q8N7G0 328 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 QKIQ96PU8 341 aaKnown RBP eCLIP17.51■□□□□ 0.397e-9■■■■■ 36.4
SPIDR-227ENST00000541342 FAM193BQ96PV7 902 aaPredicted RBP17.51■□□□□ 0.39
SPIDR-227ENST00000541342 ZCWPW1Q9H0M4 648 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 ELAC1Q9H777 363 aaKnown RBP17.51■□□□□ 0.39
SPIDR-227ENST00000541342 TNFRSF10BO14763 440 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
SPIDR-227ENST00000541342 DGKIO75912 1065 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 TPSB2P20231 275 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 KCNA4P22459 653 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 GMPRP36959 345 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 SCAPQ12770 1279 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 TPSAB1Q15661 275 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 ZRSR2Q15696 482 aaKnown RBP17.5■□□□□ 0.39
SPIDR-227ENST00000541342 CDKL3Q8IVW4 592 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-227ENST00000541342 SCML4Q8N228 414 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 DEPDC1BQ8WUY9 529 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 NTAN1Q96AB6 310 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 SORT1Q99523 831 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 DNAJC16Q9Y2G8 782 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PCDHB7Q9Y5E2 793 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 COL6A1P12109 1028 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 SLC5A3P53794 718 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 SEMA3BQ13214 749 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PDE1CQ14123 709 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-227ENST00000541342 CRIPAKQ8N1N5 446 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PIWIL2Q8TC59 973 aaKnown RBP17.5■□□□□ 0.39
SPIDR-227ENST00000541342 SCLYQ96I15 445 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 COLEC11Q9BWP8 271 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PSAT1Q9Y617 370 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 BAG2O95816 211 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 ATP5BP06576 529 aaKnown RBP17.5■□□□□ 0.39
SPIDR-227ENST00000541342 VAV1P15498 845 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 GRIK1P39086 918 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 NIPAL4Q0D2K0 466 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PCLAFQ15004 111 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 TAC4Q86UU9 113 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 MFN1Q8IWA4 741 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 PYDC1Q8WXC3 89 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 B3GALT6Q96L58 329 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 EBF3Q9H4W6 596 aa17.5■□□□□ 0.39
SPIDR-227ENST00000541342 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 F5H423 210 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 TADA2AO75478 443 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ALDH1A2O94788 518 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 IFRD2Q12894 506 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 N4BP2L1Q5TBK1 243 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 STEAP4Q687X5 459 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 TP53INP2Q8IXH6 220 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ZFAND2BQ8WV99 257 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 AZIN2Q96A70 460 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 LGMNQ99538 433 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 PIH1D1Q9NWS0 290 aaKnown RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 OGDHLQ9ULD0 1010 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 EEF2KO00418 725 aaKnown RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ZNF195O14628 629 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 TPP1O14773 563 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 SIN3BO75182 1162 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 SERPINB9P50453 376 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 VARS2Q5ST30 1063 aaKnown RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 DENND5BQ6ZUT9 1274 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 S100A14Q9HCY8 104 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 RRN3Q9NYV6 651 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 SNX10Q9Y5X0 201 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 DCLK1O15075 740 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 SLC1A6P48664 564 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 CXCR3P49682 368 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 AIF1P55008 147 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 SEMA5AQ13591 1074 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 CCNIQ14094 377 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ABI1Q8IZP0 508 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 GPR62Q9BZJ7 368 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ABI2Q9NYB9 513 aaPredicted RBP17.49■□□□□ 0.39
SPIDR-227ENST00000541342 PDP2Q9P2J9 529 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 ADAM28Q9UKQ2 775 aa17.49■□□□□ 0.39
SPIDR-227ENST00000541342 PLIN3O60664 434 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 SNUPNO95149 360 aaKnown RBP17.48■□□□□ 0.39
SPIDR-227ENST00000541342 BTKQ06187 659 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 HNRNPDQ14103 355 aaKnown RBP17.48■□□□□ 0.39
SPIDR-227ENST00000541342 STXBP5Q5T5C0 1151 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 DQX1Q8TE96 717 aaKnown RBP17.48■□□□□ 0.39
SPIDR-227ENST00000541342 SEPT8Q92599 483 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 SORCS3Q9UPU3 1222 aa17.48■□□□□ 0.39
SPIDR-227ENST00000541342 CCNT2O60583 730 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms