RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ZNF830Q96NB3 372 aaPredicted RBP19.17■□□□□ 0.66
VPS33A-205ENST00000541169 ZNF599Q96NL3 588 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 KLC2Q9H0B6 622 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 CD248Q9HCU0 757 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 SLCO3A1Q9UIG8 710 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 C3orf70A6NLC5 250 aaPredicted RBP19.16■□□□□ 0.66
VPS33A-205ENST00000541169 WASH3PC4AMC7 463 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 AXIN1O15169 862 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 SNAP91O60641 907 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 PALMO75781 387 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 MSNP26038 577 aaKnown RBP19.16■□□□□ 0.66
VPS33A-205ENST00000541169 ACVRL1P37023 503 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 WASP42768 502 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 CTSOP43234 321 aaPredicted RBP19.16■□□□□ 0.66
VPS33A-205ENST00000541169 RWDD2BP57060 319 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 IL10RBQ08334 325 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 DLG2Q15700 870 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 USP39Q53GS9 565 aaKnown RBP19.16■□□□□ 0.66
VPS33A-205ENST00000541169 PCDH19Q8TAB3 1148 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 FRS2Q8WU20 508 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 NSMCE1Q8WV22 266 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 RAPGEF5Q92565 580 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 HMCESQ96FZ2 354 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 HHIPQ96QV1 700 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 PRSS16Q9NQE7 514 aa19.16■□□□□ 0.66
VPS33A-205ENST00000541169 GOLGA6L9A6NEM1 432 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 PRAMEF11O60813 436 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 CD48P09326 243 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 SRCP12931 536 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 NR2C2P49116 596 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 PAPOLAP51003 745 aaKnown RBP19.15■□□□□ 0.66
VPS33A-205ENST00000541169 ARF5P84085 180 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 ZNF33AQ06730 810 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 CCDC15Q0P6D6 951 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 TCF15Q12870 199 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 PPP2R5EQ16537 467 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 TAZQ16635 292 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 C9orf64Q5T6V5 341 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 SLC9A4Q6AI14 798 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 ANO7Q6IWH7 933 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 TIGD7Q6NT04 549 aaPredicted RBP19.15■□□□□ 0.66
VPS33A-205ENST00000541169 CPNE8Q86YQ8 564 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 PGBD3Q8N328 593 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 BBS5Q8N3I7 341 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 HMGB4Q8WW32 186 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 OR8D1Q8WZ84 308 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 PRCCQ92733 491 aaPredicted RBP19.15■□□□□ 0.66
VPS33A-205ENST00000541169 FATE1Q969F0 183 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 LRIG1Q96JA1 1093 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 MRGPRX1Q96LB2 322 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 SLC39A8Q9C0K1 460 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 BRD8Q9H0E9 1235 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 RSPH9Q9H1X1 276 aaPredicted RBP19.15■□□□□ 0.66
VPS33A-205ENST00000541169 ZDHHC4Q9NPG8 344 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 LZTFL1Q9NQ48 299 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 C2orf42Q9NWW7 574 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 HYOU1Q9Y4L1 999 aa19.15■□□□□ 0.66
VPS33A-205ENST00000541169 TTC34A8MYJ7 566 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 DFFAO00273 331 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 APOL1O14791 398 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 MCF2LO15068 1137 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 ACADMP11310 421 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 TNNT1P13805 278 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 GABRG2P18507 467 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 PTPN7P35236 360 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 CDKN2BP42772 138 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 STK19P49842 368 aaPredicted RBP19.14■□□□□ 0.65
VPS33A-205ENST00000541169 MMRN1Q13201 1228 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 TTC31Q49AM3 519 aaPredicted RBP19.14■□□□□ 0.65
VPS33A-205ENST00000541169 FAM46CQ5VWP2 391 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 ZNF776Q68DI1 518 aaPredicted RBP19.14■□□□□ 0.65
VPS33A-205ENST00000541169 KIAA1211LQ6NV74 962 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 C22orf39Q6P5X5 142 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 TMPRSS6Q8IU80 811 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 ARHGAP12Q8IWW6 846 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 ATPAF2Q8N5M1 289 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 NPWQ8N729 165 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 PRSS33Q8NF86 280 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 MDGA1Q8NFP4 955 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 PTPRN2Q92932 1015 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 SIPA1Q96FS4 1042 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 SPACA7Q96KW9 195 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 SP110Q9HB58 689 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 KLHL11Q9NVR0 708 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 UBA2Q9UBT2 640 aaPredicted RBP19.14■□□□□ 0.65
VPS33A-205ENST00000541169 TRIM10Q9UDY6 481 aa19.14■□□□□ 0.65
VPS33A-205ENST00000541169 IPO11Q9UI26 975 aaKnown RBP19.14■□□□□ 0.65
VPS33A-205ENST00000541169 ANTXRLA6NF34 631 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 LILRB5O75023 590 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 ZNF189O75820 626 aaPredicted RBP19.13■□□□□ 0.65
VPS33A-205ENST00000541169 ADH1BP00325 375 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 GSRP00390 522 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 HLA-EP13747 358 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 COL9A1P20849 921 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 OXTRP30559 389 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 HSPA9P38646 679 aaKnown RBP19.13■□□□□ 0.65
VPS33A-205ENST00000541169 RENBPP51606 427 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 SNRPD1P62314 119 aaKnown RBP19.13■□□□□ 0.65
VPS33A-205ENST00000541169 RAD51Q06609 339 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 GALNT2Q10471 571 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms