RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ATG4CQ96DT6 458 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 EPB41L4BQ9H329 900 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 GIN1Q9NXP7 522 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ARHGAP28Q9P2N2 729 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 SEC22BO75396 215 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 CABYRO75952 493 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 GSTM1P09488 218 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 CRHR1P34998 444 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 NDST1P52848 882 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 YWHAZP63104 245 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 TUBA4AP68366 448 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 TTC30BQ8N4P2 665 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 KLHL28Q9NXS3 571 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 UBP1Q9NZI7 540 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 EFR3BQ9Y2G0 817 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 PLLPQ9Y342 182 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 CAPN8A6NHC0 703 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 NPR3P17342 541 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 IFNGR2P38484 337 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF143P52747 638 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 PACS1Q6VY07 963 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 SLC44A1Q8WWI5 657 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 Q96MT0 163 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 MRPL39Q9NYK5 338 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF624Q9P2J8 865 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 GNEQ9Y223 722 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 GAKO14976 1311 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 NADKO95544 446 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 SERPINF2P08697 491 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CCR1P32246 355 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 HGSNATQ68CP4 663 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF540Q8NDQ6 660 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 MYLPFQ96A32 169 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 OTUD5Q96G74 571 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 QTRT2Q9H974 415 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 MOV10Q9HCE1 1003 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 SLC17A7Q9P2U7 560 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 DSEQ9UL01 958 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNRF3Q9ULT6 936 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 TBC1D30Q9Y2I9 924 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CNTNAP4Q9C0A0 1308 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 DIP2AQ14689 1571 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CCNT2O60583 730 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 S100A9P06702 114 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 TKTL1P51854 596 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 RPL26P61254 145 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 KLF10Q13118 480 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 ASZ1Q8WWH4 475 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 EBF2Q9HAK2 575 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CYP3A7P24462 503 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 HALP42357 657 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CES3Q6UWW8 571 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 AMIGO2Q86SJ2 522 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CACTIN-AS1Q8N1I8 211 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 FBXO30Q8TB52 745 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 HGH1Q9BTY7 390 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 LRRC4CQ9HCJ2 640 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 CYB561D2O14569 222 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 EPN2O95208 641 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 TRUB2O95900 331 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 ADSLP30566 484 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 GTF2BQ00403 316 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 IL17AQ16552 155 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 C11orf74Q86VG3 221 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 STAG3L4Q8TBR4 150 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF670Q9BS34 389 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 TRIM39Q9HCM9 518 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 TRNAU1APQ9NX07 287 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 PLA2G4CQ9UP65 541 aa15.16■□□□□ 0.02
SMARCA4-207ENST00000541122 USP46P62068 366 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 INTS11Q5TA45 600 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 PNPT1Q8TCS8 783 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 AP3S1Q92572 193 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 TPD52L3Q96J77 140 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 SEPT5Q99719 369 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 TRMOQ9BU70 441 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 UNKQ9C0B0 810 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 LNPEPQ9UIQ6 1025 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 MAGEL2Q9UJ55 1249 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 CLCA2Q9UQC9 943 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 FADS3Q9Y5Q0 445 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 MLYCDO95822 493 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF549Q6P9A3 640 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 SLCO6A1Q86UG4 719 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 KAT5Q92993 513 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 DBTP11182 482 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 KPNA1P52294 538 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 OLR1P78380 273 aa15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 ZIK1Q3SY52 487 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-207ENST00000541122 SPESP1Q6UW49 350 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms