RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 GAS2L3Q86XJ1 694 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 MMAAQ8IVH4 418 aaKnown RBP13.69□□□□□ -0.22
CCDC130-202ENST00000540216 SLC41A1Q8IVJ1 513 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 UMODL1-AS1Q8N2C9 162 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 PCDH20Q8N6Y1 951 aaKnown RBP13.69□□□□□ -0.22
CCDC130-202ENST00000540216 TC2NQ8N9U0 490 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 C12orf50Q8NA57 414 aaPredicted RBP13.69□□□□□ -0.22
CCDC130-202ENST00000540216 ZNF564Q8TBZ8 553 aaPredicted RBP13.69□□□□□ -0.22
CCDC130-202ENST00000540216 PIGKQ92643 395 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 ARHGEF26Q96DR7 871 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 FAM129BQ96TA1 746 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 CHP1Q99653 195 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 GPR174Q9BXC1 333 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 BTBD1Q9H0C5 482 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 ZWILCHQ9H900 591 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 SGK2Q9HBY8 427 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 NDFIP2Q9NV92 336 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 GPATCH2LQ9NWQ4 482 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 CTTNBP2NLQ9P2B4 639 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 SUSD2Q9UGT4 822 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 EVLQ9UI08 416 aaPredicted RBP13.69□□□□□ -0.22
CCDC130-202ENST00000540216 PILRBQ9UKJ0 227 aa13.69□□□□□ -0.22
CCDC130-202ENST00000540216 MEI4A8MW99 385 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 KHNYNO15037 678 aaKnown RBP13.68□□□□□ -0.22
CCDC130-202ENST00000540216 MT-CO1P00395 513 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 GLDCP23378 1020 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 SLC8A1P32418 973 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 RECQLP46063 649 aaPredicted RBP13.68□□□□□ -0.22
CCDC130-202ENST00000540216 PSMD8P48556 350 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 ARF5P84085 180 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 DPYSL2Q16555 572 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 RFX8Q6ZV50 586 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 ARMCX6Q7L4S7 300 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 FAM124AQ86V42 546 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 CEP76Q8TAP6 659 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 GANCQ8TET4 914 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 ISG20Q96AZ6 181 aaKnown RBP13.68□□□□□ -0.22
CCDC130-202ENST00000540216 FBXL12Q9NXK8 326 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 INTUQ9ULD6 942 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 CEP192Q8TEP8 1941 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
CCDC130-202ENST00000540216 METTL12A8MUP2 240 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 H3BRJ5 948 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 K7ERQ8 282 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 MID1O15344 667 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 DAPK3O43293 454 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 KDELR3O43731 214 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 SEMA4FO95754 770 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 IL1BP01584 269 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 GOT1P17174 413 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 ITPKAP23677 461 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 ACVRL1P37023 503 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 ARL4AP40617 200 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 NDST2P52849 883 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 SLC25A11Q02978 314 aaKnown RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 CCDC6Q16204 474 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 CA9Q16790 459 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 HADHQ16836 314 aaKnown RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 DUOXA1Q1HG43 343 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 AASDHQ4L235 1098 aaPredicted RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 PPP6R3Q5H9R7 873 aaPredicted RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 PLPP6Q8IY26 295 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 OR2A12Q8NGT7 310 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 NETO1Q8TDF5 533 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 DNASE2BQ8WZ79 361 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 OMDQ99983 421 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 NOL6Q9H6R4 1146 aaKnown RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 PPM1HQ9ULR3 514 aa13.67□□□□□ -0.22
CCDC130-202ENST00000540216 TPX2Q9ULW0 747 aaKnown RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.67□□□□□ -0.22
CCDC130-202ENST00000540216 A0A1W2PP55 124 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 RASA4BC9J798 803 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 SLC7A4O43246 635 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 RASA4O43374 803 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 SMAD6O43541 496 aaKnown RBP13.66□□□□□ -0.22
CCDC130-202ENST00000540216 RNASEH2AO75792 299 aaKnown RBP13.66□□□□□ -0.22
CCDC130-202ENST00000540216 PROSCO94903 275 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 PRNPP04156 253 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 RARAP10276 462 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 GNSP15586 552 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 IL1R2P27930 398 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 ACSL1P33121 698 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 MAN1A1P33908 653 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 LIMK1P53667 647 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 SERINC3Q13530 473 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 DPYSQ14117 519 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 SF3A2Q15428 464 aaKnown RBP13.66□□□□□ -0.22
CCDC130-202ENST00000540216 TRIM61Q5EBN2 209 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 DAB2IPQ5VWQ8 1189 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 SLC23A3Q6PIS1 610 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 ZNF354CQ86Y25 554 aa13.66□□□□□ -0.22
CCDC130-202ENST00000540216 RHOT2Q8IXI1 618 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms