RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 EMID1Q96A84 441 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 TMEM143Q96AN5 459 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 HEMK1Q9Y5R4 338 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 MYH11P35749 1972 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 J3QRK9 145 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 LIASO43766 372 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 CCNT2O60583 730 aaKnown RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 CD4P01730 458 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 RB1P06400 928 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 KRT3P12035 628 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 FGFR3P22607 806 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 ME2P23368 584 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 MXD4Q14582 209 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 SIX1Q15475 284 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 NEDD8Q15843 81 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 FASTKD1Q53R41 847 aaKnown RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 RELL1Q8IUW5 271 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 TNIP2Q8NFZ5 429 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 FBXL8Q96CD0 374 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 OSBPL11Q9BXB4 747 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 OSBPL10Q9BXB5 764 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 EMILIN2Q9BXX0 1053 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 ING2Q9H160 280 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 NSUN3Q9H649 340 aaKnown RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 PARVAQ9NVD7 372 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 KANSL3Q9P2N6 904 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 TBX20Q9UMR3 447 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 KANSL1LA0AUZ9 987 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 TRIM64CA6NLI5 447 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 COX4I1P13073 169 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 ACAT1P24752 427 aaKnown RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 SLC1A6P48664 564 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 MNX1P50219 401 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 KPNA1P52294 538 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 SP2Q02086 613 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 CCNIQ14094 377 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 SPOPLQ6IQ16 392 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.84□□□□□ -0.993e-18■■■■□ 24.6
DDB1-217ENST00000540166 ALDH16A1Q8IZ83 802 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 ZSCAN18Q8TBC5 510 aaPredicted RBP8.84□□□□□ -0.99
DDB1-217ENST00000540166 DLG3Q92796 817 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 PBXIP1Q96AQ6 731 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 SH3GL1Q99961 368 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 EBF4Q9BQW3 602 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 COLEC11Q9BWP8 271 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 SPG21Q9NZD8 308 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 PCSK1NQ9UHG2 260 aa8.84□□□□□ -0.99
DDB1-217ENST00000540166 DAB1O75553 588 aa8.83□□□□□ -1
DDB1-217ENST00000540166 MTA2O94776 668 aa8.83□□□□□ -1
DDB1-217ENST00000540166 HLA-DRAP01903 254 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ITGB8P26012 769 aa8.83□□□□□ -1
DDB1-217ENST00000540166 PEX6Q13608 980 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ADGRE1Q14246 886 aa8.83□□□□□ -1
DDB1-217ENST00000540166 NFIL3Q16649 462 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CCDC60Q8IWA6 550 aaPredicted RBP8.83□□□□□ -1
DDB1-217ENST00000540166 METTL25Q8N6Q8 603 aa8.83□□□□□ -1
DDB1-217ENST00000540166 FAM47BQ8NA70 645 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ACTRT2Q8TDY3 377 aa8.83□□□□□ -1
DDB1-217ENST00000540166 SLC35B4Q969S0 331 aa8.83□□□□□ -1
DDB1-217ENST00000540166 NOL6Q9H6R4 1146 aaKnown RBP8.83□□□□□ -1
DDB1-217ENST00000540166 POLR1BQ9H9Y6 1135 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CXorf21Q9HAI6 301 aa8.83□□□□□ -1
DDB1-217ENST00000540166 INIPQ9NRY2 104 aa8.83□□□□□ -1
DDB1-217ENST00000540166 NOCTQ9UK39 431 aaKnown RBP8.83□□□□□ -1
DDB1-217ENST00000540166 SLC8A2Q9UPR5 921 aa8.83□□□□□ -1
DDB1-217ENST00000540166 GIT1Q9Y2X7 761 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CDY1Q9Y6F8 540 aa8.83□□□□□ -1
DDB1-217ENST00000540166 A0A087WZ62 844 aa8.83□□□□□ -1
DDB1-217ENST00000540166 GOLGA8QA0A0J9YX86 632 aa8.83□□□□□ -1
DDB1-217ENST00000540166 GOLGA8OA6NCC3 632 aa8.83□□□□□ -1
DDB1-217ENST00000540166 GOLGA8NF8WBI6 632 aa8.83□□□□□ -1
DDB1-217ENST00000540166 KRT19P08727 400 aa8.83□□□□□ -1
DDB1-217ENST00000540166 KCNA2P16389 499 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ADAM17P78536 824 aa8.83□□□□□ -1
DDB1-217ENST00000540166 BORAQ6PGQ7 559 aa8.83□□□□□ -1
DDB1-217ENST00000540166 TAS2R42Q7RTR8 314 aa8.83□□□□□ -1
DDB1-217ENST00000540166 PEX5LQ8IYB4 626 aa8.83□□□□□ -1
DDB1-217ENST00000540166 MYO1HQ8N1T3 1032 aa8.83□□□□□ -1
DDB1-217ENST00000540166 KCTD6Q8NC69 237 aa8.83□□□□□ -1
DDB1-217ENST00000540166 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
DDB1-217ENST00000540166 MCEEQ96PE7 176 aa8.83□□□□□ -1
DDB1-217ENST00000540166 FDXACB1Q9BRP7 624 aaPredicted RBP8.83□□□□□ -1
DDB1-217ENST00000540166 WRAP73Q9P2S5 460 aaPredicted RBP8.83□□□□□ -1
DDB1-217ENST00000540166 NENFQ9UMX5 172 aa8.83□□□□□ -1
DDB1-217ENST00000540166 AURKCQ9UQB9 309 aa8.83□□□□□ -1
DDB1-217ENST00000540166 IGLV3-22A0A075B6J6 115 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CCDC162PA2VCL2 907 aa8.83□□□□□ -1
DDB1-217ENST00000540166 K7ERI5 159 aa8.83□□□□□ -1
DDB1-217ENST00000540166 MGEA5O60502 916 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CST8O60676 142 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CSDE1O75534 798 aaKnown RBP8.83□□□□□ -1
DDB1-217ENST00000540166 CXCL14O95715 111 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CHEK2O96017 543 aa8.83□□□□□ -1
DDB1-217ENST00000540166 SMIM18P0DKX4 95 aa8.83□□□□□ -1
DDB1-217ENST00000540166 FGFR1P11362 822 aa8.83□□□□□ -1
DDB1-217ENST00000540166 MYL4P12829 197 aa8.83□□□□□ -1
DDB1-217ENST00000540166 PSMA2P25787 234 aa8.83□□□□□ -1
DDB1-217ENST00000540166 NPTX2P47972 431 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CDH15P55291 814 aa8.83□□□□□ -1
DDB1-217ENST00000540166 TAS2R40P59535 323 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms