RNA–Protein interactions for RNA: ENST00000539994.5

GTF2H3-208, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-208ENST00000539994 RSRC1Q96IZ7 334 aaKnown RBP4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 PRAM1Q96QH2 718 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 TREX2Q9BQ50 279 aaPredicted RBP4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 NUDT16L1Q9BRJ7 211 aaKnown RBP4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 SDF4Q9BRK5 362 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 MLST8Q9BVC4 326 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 NRDE2Q9H7Z3 1164 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 PLEKHA2Q9HB19 425 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 LIN7CQ9NUP9 197 aaKnown RBP4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 NFU1Q9UMS0 254 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 GPR34Q9UPC5 381 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 SSX2IPQ9Y2D8 614 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 SLC27A6Q9Y2P4 619 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 NEU2Q9Y3R4 380 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 FN1P02751 2386 aaKnown RBP4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 LRRK2Q5S007 2527 aa4.1□□□□□ -1.75
GTF2H3-208ENST00000539994 NBEAL1Q6ZS30 2694 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PRAMEF33A0A0G2JMD5 474 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 GXYLT2A0PJZ3 443 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 ZNF185O15231 689 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CYP27B1O15528 508 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 AHCYL1O43865 530 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PRAMEF10O60809 474 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 TMCC2O75069 709 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 LARGE1O95461 756 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 IL9P15248 144 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 DRD1P21728 446 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 FBLP22087 321 aaKnown RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RPS6KB1P23443 525 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 EPHA3P29320 983 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PSMC2P35998 433 aaKnown RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 GGT5P36269 586 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PBX1P40424 430 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RAD52P43351 418 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 POLD2P49005 469 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CDK7P50613 346 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CCT4P50991 539 aaKnown RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CCR9P51686 369 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CLNS1AP54105 237 aaKnown RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 FAM3BP58499 235 aaPredicted RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RNASELQ05823 741 aaKnown RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 GPR68Q15743 365 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CD300EQ496F6 205 aaPredicted RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 LRCH2Q5VUJ6 765 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 SFRP4Q6FHJ7 346 aaPredicted RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 ANO7Q6IWH7 933 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 FOXR2Q6PJQ5 311 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RINLQ6ZS11 566 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PIK3AP1Q6ZUJ8 805 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 B4GALNT4Q76KP1 1039 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RASGRP2Q7LDG7 609 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 ABRAQ8N0Z2 381 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 GALNT4Q8N4A0 578 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 FAM109AQ8N4B1 249 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 LRRC71Q8N4P6 559 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 Q8NA96 180 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 LINS1Q8NG48 757 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 SLC22A17Q8WUG5 538 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 OSCP1Q8WVF1 389 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 ATRIPQ8WXE1 791 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 TMEM125Q96AQ2 219 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RBM17Q96I25 401 aaKnown RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 HAPLN3Q96S86 360 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 MPHOSPH9Q99550 1183 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 C17orf80Q9BSJ5 609 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PRDM13Q9H4Q3 707 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CCDC134Q9H6E4 229 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PRKRIP1Q9H875 184 aaPredicted RBP4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 RMI1Q9H9A7 625 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 MUTYHQ9UIF7 546 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 SORCS3Q9UPU3 1222 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 PCDHB7Q9Y5E2 793 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 CYP46A1Q9Y6A2 500 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 MTCH2Q9Y6C9 303 aa4.09□□□□□ -1.75
GTF2H3-208ENST00000539994 FREM2Q5SZK8 3169 aa4.09□□□□□ -1.76
GTF2H3-208ENST00000539994 AFDNP55196 1824 aaKnown RBP4.09□□□□□ -1.76
GTF2H3-208ENST00000539994 NF1P21359 2839 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 A0A1W2PS29 197 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 PI4KAP2A4QPH2 592 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 F5H697 171 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 CCER2I3L3R5 266 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 M0QYT0 321 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 PEX12O00623 359 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 CTIFO43310 598 aaKnown RBP4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 TMEM63AO94886 807 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 FRYLO94915 3013 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 WDR47O94967 919 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 HEXIM1O94992 359 aaKnown RBP4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 VNN1O95497 513 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 HLA-DOAP06340 250 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 ELANEP08246 267 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 CHMP24386 653 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 LMO1P25800 156 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 ZFP36P26651 326 aaKnown RBP4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 THBS4P35443 961 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 PGM1P36871 562 aa4.08□□□□□ -1.76
GTF2H3-208ENST00000539994 GSTM5P46439 218 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms