RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 OAS1P00973 400 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 APOEP02649 317 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 RPSAP08865 295 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 CHN1P15882 459 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 GABRR2P28476 465 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 FDFT1P37268 417 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 GARSP41250 739 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 KPNA1P52294 538 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 BASP1P80723 227 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 CDK16Q00536 496 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 KCNC3Q14003 757 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 FASTKD3Q14CZ7 662 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 KYNUQ16719 465 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 SPRED3Q2MJR0 410 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 C5orf22Q49AR2 442 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ANKRD20A2Q5SQ80 823 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ZNF697Q5TEC3 545 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ANKRD20A1Q5TYW2 823 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ANKRD20A3Q5VUR7 823 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 NAIF1Q69YI7 327 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 ELMSAN1Q6PJG2 1045 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 CENPUQ71F23 418 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 C11orf96Q7Z7L8 435 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 MIB1Q86YT6 1006 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 EGFL6Q8IUX8 553 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 CACTIN-AS1Q8N1I8 211 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 RTL3Q8N8U3 475 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 ATP6V0D2Q8N8Y2 350 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 VN1R2Q8NFZ6 395 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ZNF483Q8TF39 744 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 SPDL1Q96EA4 605 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 STAMBPL1Q96FJ0 436 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 CDCA3Q99618 268 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 CORO1BQ9BR76 489 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 CATSPERBQ9H7T0 1116 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 SAYSD1Q9NPB0 183 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 EIF2B3Q9NR50 452 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 ASAH2Q9NR71 780 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 RAB6BQ9NRW1 208 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 DNAJC17Q9NVM6 304 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 HCFC1R1Q9NWW0 138 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 EURLQ9NYK6 297 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ZNF212Q9UDV6 495 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 DNMT3LQ9UJW3 386 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 CLUHO75153 1309 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 ANKRD36A6QL64 1941 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 CCDC195A0A1B0GUA6 201 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 C2orf78A6NCI8 922 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 ANKRD33BA6NCL7 494 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 COCHO43405 550 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 AHCYL1O43865 530 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 XYLBO75191 536 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 SMNDC1O75940 238 aaKnown RBP eCLIP9.03□□□□□ -0.965e-6■■■■□ 22.7
DDB1-213ENST00000539332 ATP5HO75947 161 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 ACSL3O95573 720 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 POU2F2P09086 479 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 PTPN3P26045 913 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 ATP5C1P36542 298 aaKnown RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 NUBP1P53384 320 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 EPHA5P54756 1037 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 CCDC15Q0P6D6 951 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 BLMHQ13867 455 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 MS4A13Q5J8X5 152 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 FNBP1LQ5T0N5 605 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 NUGGCQ68CJ6 796 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 EP400NLQ6ZTU2 488 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 ZNF534Q76KX8 674 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 C14orf80Q86SX3 495 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 CAND1Q86VP6 1230 aaKnown RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 LRRC49Q8IUZ0 686 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 LRRN4Q8WUT4 740 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 FATE1Q969F0 183 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 ZNF707Q96C28 371 aaPredicted RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 C9orf72Q96LT7 481 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 SERPINB12Q96P63 405 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 FERMT1Q9BQL6 677 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 PRKD2Q9BZL6 878 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 NACA2Q9H009 215 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 TTYH1Q9H313 450 aaPredicted RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 NSUN3Q9H649 340 aaKnown RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 RETREG1Q9H6L5 497 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 DNMT3BQ9UBC3 853 aaKnown RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
DDB1-213ENST00000539332 UNC80Q8N2C7 3258 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 DOCK8Q8NF50 2099 aa9.03□□□□□ -0.96
DDB1-213ENST00000539332 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 DRGXA6NNA5 263 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 CACNG3O60359 315 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 SNX3O60493 162 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 STK10O94804 968 aaKnown RBP9.02□□□□□ -0.97
DDB1-213ENST00000539332 PAPLNO95428 1278 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 FESP07332 822 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 RHOP08100 348 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 MYL4P12829 197 aa9.02□□□□□ -0.97
DDB1-213ENST00000539332 RHOQP17081 205 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms