RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MMP13P45452 471 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ST8SIA6P61647 398 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FOXK1P85037 733 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CAV1Q03135 178 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CUL1Q13616 776 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 LBRQ14739 615 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PRKD1Q15139 912 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 AAK1Q2M2I8 961 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 EML3Q32P44 896 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ITPRIPL2Q3MIP1 535 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ANKRD20A2Q5SQ80 823 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TMCO4Q5TGY1 634 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ANKRD20A1Q5TYW2 823 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ANKRD20A3Q5VUR7 823 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GRAMD4Q6IC98 578 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RHBDF2Q6PJF5 856 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TP53INP2Q8IXH6 220 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 UCMAQ8WVF2 138 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 NUP205Q92621 2012 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RSPRY1Q96DX4 576 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SPATA13Q96N96 652 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 OLFM3Q96PB7 478 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TSGA13Q96PP4 275 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PPP1R2P1Q96PQ5 205 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CEP41Q9BYV8 373 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CIPCQ9C0C6 399 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 EPC1Q9H2F5 836 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ECT2Q9H8V3 914 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 NT5MQ9NPB1 228 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ABCB8Q9NUT2 735 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 EPS15L1Q9UBC2 864 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TPX2Q9ULW0 747 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TBC1D30Q9Y2I9 924 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 NUMBLQ9Y6R0 609 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SHROOM3Q8TF72 1996 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 A0A0C4DFX4 3053 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 A0A0D9SEW6 157 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TBC1D3BA6NDS4 549 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 C5orf60A6NFR6 353 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 J3KR12 359 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 BNIP3LO60238 219 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GCATO75600 419 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CYP17A1P05093 508 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ATP5BP06576 529 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PABPC1P11940 636 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 HOXD9P28356 352 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MZF1P28698 734 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RECQLP46063 649 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PLTPP55058 493 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 KDSRQ06136 332 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SULT2A1Q06520 285 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 LMAN2Q12907 356 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 DMC1Q14565 340 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PARP6Q2NL67 630 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TEX44Q53QW1 395 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FSCBQ5H9T9 825 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PITRM1Q5JRX3 1037 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FYB2Q5VWT5 728 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PPP1R21Q6ZMI0 780 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ARHGAP36Q6ZRI8 547 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CEP128Q6ZU80 1094 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PRUNE1Q86TP1 453 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ARHGAP12Q8IWW6 846 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 AHI1Q8N157 1196 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MAFAQ8NHW3 353 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 WFIKKN2Q8TEU8 576 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SUSD6Q92537 303 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RUBCNQ92622 972 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FGF14Q92915 247 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SLCO2A1Q92959 643 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ZNF599Q96NL3 588 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FEM1AQ9BSK4 669 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PARD6BQ9BYG5 372 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PLA2G2FQ9BZM2 168 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SEPT3Q9UH03 358 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 DMGDHQ9UI17 866 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GGA2Q9UJY4 613 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PLA2G4CQ9UP65 541 aa10.87□□□□□ -0.67
TNFRSF1A-211ENST00000538363 DOCK4Q8N1I0 1966 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 C2CD4DB7Z1M9 353 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ZBTB24O43167 697 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MAFKO60675 156 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PRAMEF11O60813 436 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ANXA9O76027 345 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PENKP01210 267 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 APODP05090 189 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 VAV1P15498 845 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PTPN3P26045 913 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CD70P32970 193 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ITGA8P53708 1063 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GEMP55040 296 aa10.86□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GDF10P55107 478 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms