RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 FASTKD1Q53R41 847 aaKnown RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 CMPK2Q5EBM0 449 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 GNASQ5JWF2 1037 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 RABGAP1LQ5R372 815 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 ARMC3Q5W041 872 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 BSPRYQ5W0U4 402 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 AFMIDQ63HM1 303 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 C16orf46Q6P387 395 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 CASC4Q6P4E1 433 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 CXCL17Q6UXB2 119 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 C4orf50Q6ZRC1 276 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 RINLQ6ZS11 566 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 TTC7BQ86TV6 843 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 ALYREFQ86V81 257 aaKnown RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 CEP57Q86XR8 500 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 ARID3BQ8IVW6 561 aaPredicted RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 ARHGAP12Q8IWW6 846 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 OR10T2Q8NGX3 314 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 ZNF669Q96BR6 464 aaPredicted RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 HAPLN3Q96S86 360 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 IL12RB2Q99665 862 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 RHOBTB2Q9BYZ6 727 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 NMUR2Q9GZQ4 415 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 SMOC2Q9H3U7 446 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 WDCPQ9H6R7 721 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 BFARQ9NZS9 450 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 OR12D3Q9UGF7 316 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 VANGL2Q9ULK5 521 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 SORCS3Q9UPU3 1222 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 L3MBTL1Q9Y468 752 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 SNX10Q9Y5X0 201 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 RPS6KL1Q9Y6S9 549 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 CCDC195A0A1B0GUA6 201 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ARHGEF37A1IGU5 675 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 C2orf71A6NGG8 1288 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 WASH4PA8MWX3 477 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 TMEM189-UBE2V1I3L0A0 370 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ARVCFO00192 962 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 FGF10O15520 208 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 MAGEC1O60732 1142 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ANP32DO95626 131 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 LMNAP02545 664 aaKnown RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 MPOP05164 745 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 SERPINA6P08185 405 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 TPBGLP0DKB5 382 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ERVK-10P10266 1014 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 IGFBP4P22692 258 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 CCNCP24863 283 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 GRK2P25098 689 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 DNAJB1P25685 340 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 CD52P31358 61 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 GCKP35557 465 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 RAP1GDS1P52306 607 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 RPL10AP62906 217 aaKnown RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 PPIGQ13427 754 aaKnown RBP eCLIP9.42□□□□□ -0.99e-6■■■■□ 22.2
DDB1-211ENST00000538280 OLIG2Q13516 323 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 TREML1Q86YW5 311 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 DCLK2Q8N568 766 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 LZTR1Q8N653 840 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 CNTD1Q8N815 330 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 STON2Q8WXE9 905 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 EDEM1Q92611 657 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 ATP2A3Q93084 1043 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 GLT1D1Q96MS3 346 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 FCRL5Q96RD9 977 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 UHRF1Q96T88 793 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 GAS2L1Q99501 681 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 SORT1Q99523 831 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 KIFC1Q9BW19 673 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 IL22Q9GZX6 179 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 FAM96AQ9H5X1 160 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 DENND2DQ9H6A0 471 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 SPC25Q9HBM1 224 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 SNX15Q9NRS6 342 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 DNAJC28Q9NX36 388 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 TAS2R1Q9NYW7 299 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 TMEM216Q9P0N5 145 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 FNIP2Q9P278 1114 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 COPG2Q9UBF2 871 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 NKX1-2Q9UD57 310 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 PCDHB8Q9UN66 801 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 PLA2G4CQ9UP65 541 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 MYLKQ15746 1914 aa9.42□□□□□ -0.9
DDB1-211ENST00000538280 NYNRINQ9P2P1 1898 aaKnown RBP9.42□□□□□ -0.9
DDB1-211ENST00000538280 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
DDB1-211ENST00000538280 TET1Q8NFU7 2136 aa9.41□□□□□ -0.9
DDB1-211ENST00000538280 EPOPA6NHQ4 379 aa9.41□□□□□ -0.9
DDB1-211ENST00000538280 ARHGAP42A6NI28 874 aa9.41□□□□□ -0.9
DDB1-211ENST00000538280 VGLL3A8MV65 326 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms